myRT

myRT report for GCA_002193445.1_ASM219344v1

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Seq: NHQD01000001.1 Escherichia coli strain 5937 5937_NODE_1_length_997204_cov_51.0033_ID_2554, whole genome shotgun sequence (997204 bp)
Overview 1 RT 1: 37289-43289 bp Neighborhood of RT #1 [37289, 43435] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 37289-37398 bp Feature: domain Description: SfsB Location: 37298-37364 bp Feature: domain Description: SfsB Location: 37298-37364 bp Feature: gene Location: 37395-37865 bp Feature: gene Location: 38212-41421 bp Ori: OWH00268.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 38740-39229 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 38740-39229 bp Feature: domain Description: nitrilase Location: 40735-41332 bp Feature: domain Description: nitrilase Location: 40735-41 332 bp Feature: gene Location: 41716-42519 bp Ori: OWH00269.1 Feature: domain Description: AbiEi_3_N Location: 41749-42010 bp Feature: domain Description: AbiEi_3_N Location: 41 749-4201 0 bp Feature: domain Description: AbiEi_3 Location: 42025-42478 bp Feature: domain Description: AbiEi_3 Location: 42025-42478 bp Feature: gene Location: 42506-43435 bp Ori: OWH00270.1 Feature: domain Description: AbiEii Location: 42548-43289 bp Feature: domain Description: AbiEii Location: 42548-43289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: NHQD01000007.1 Escherichia coli strain 5937 5937_NODE_7_length_272746_cov_56.6237_ID_2566, whole genome shotgun sequence (272746 bp)
Overview 1 RT 1: 116489-120368 bp Neighborhood of RT #1 [116489, 120373] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 116489-116944 bp Ori: OWG96248.1 Feature: domain Description: dut Location: 116492-116939 bp Feature: domain Description: dut Location: 116492 -116939 bp Feature: gene Location: 117051-117647 bp Ori: OWG96119.1 Feature: domain Description: slmA Location: 117057-117633 bp Feature: domain Description: slmA Location: 117057-117633 bp Feature: gene Location: 117693-118652 bp Ori: OWG96120.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117828-118377 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11782 8-118377 bp Feature: gene Location: 118950-119591 bp Ori: OWG96121.1 Feature: domain Description: pyrE Location: 118953-119586 bp Feature: domain Description: pyrE Location: 118953-119586 bp Feature: gene Location: 119657-120373 bp Ori: OWG96122.1 Feature: domain Description: rph Location: 119660-120368 bp Feature: domain Description: rph Location: 119660-12 0368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)