myRT

myRT report for GCA_002193495.1_ASM219349v1

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Seq: NHQJ01000001.1 Escherichia coli strain 5883 5883_NODE_1_length_838763_cov_26.1998_ID_3194, whole genome shotgun sequence (838763 bp)
Overview 1 RT 1: 37289-43289 bp Neighborhood of RT #1 [37289, 43435] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 37289-37398 bp Feature: domain Description: SfsB Location: 37298-37364 bp Feature: domain Description: SfsB Location: 37298-37364 bp Feature: gene Location: 37395-37865 bp Feature: gene Location: 38212-41421 bp Ori: OWH27749.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 38740-39229 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 38740-39229 bp Feature: domain Description: nitrilase Location: 40735-41332 bp Feature: domain Description: nitrilase Location: 40735-41 332 bp Feature: gene Location: 41716-42519 bp Ori: OWH27750.1 Feature: domain Description: AbiEi_3_N Location: 41749-42010 bp Feature: domain Description: AbiEi_3_N Location: 41 749-4201 0 bp Feature: domain Description: AbiEi_3 Location: 42025-42478 bp Feature: domain Description: AbiEi_3 Location: 42025-42478 bp Feature: gene Location: 42506-43435 bp Ori: OWH27751.1 Feature: domain Description: AbiEii Location: 42548-43289 bp Feature: domain Description: AbiEii Location: 42548-43289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: NHQJ01000020.1 Escherichia coli strain 5883 5883_NODE_20_length_54777_cov_29.627_ID_3232, whole genome shotgun sequence (54777 bp)
Overview 1 RT 1: 41125-45004 bp Neighborhood of RT #1 [41125, 45009] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 41125-41841 bp Ori: OWH23902.1 Feature: domain Description: rph Location: 41128-41836 bp Feature: domain Description: rph Location: 4112 8-41836 bp Feature: gene Location: 41907-42548 bp Ori: OWH23903.1 Feature: domain Description: pyrE Location: 41910-42543 bp Feature: domain Description: pyrE Location: 41910-42 543 bp Feature: gene Location: 42846-43805 bp Ori: OWH23904.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42981-43530 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 981-43530 bp Feature: gene Location: 43851-44447 bp Ori: OWH23905.1 Feature: domain Description: slmA Location: 43857-44433 bp Feature: domain Description: slmA Location: 43857-44433 bp Feature: gene Location: 44554-45009 bp Ori: OWH23918.1 Feature: domain Description: dut Location: 44557-45004 bp Feature: domain Description: dut Location: 44557-45004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)