myRT

myRT report for GCA_002194155.1_ASM219415v1

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Seq: NGQU01000004.1 Vibrio cholerae O139 strain FC1877 NODE_4_length_343937_cov_48.8104_ID_7, whole genome shotgun sequence (343937 bp)
Overview 1 RT 1: 123501-128736 bp Neighborhood of RT #1 [123501, 128762] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123501-124118 bp Feature: domain Description: TIGR02646 Location: 123612-123996 bp Feature: domain Description: TIGR02646 Location: 1 2361 2-1 23996 bp Feature: gene Location: 124131-125753 bp Feature: domain Description: COG3950 Location: 124317-125748 bp Feature: domain Description: COG3950 Location: 1 2431 7-1 25748 bp Feature: gene Location: 125754-126725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125892-126489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25892-1 26489 bp Feature: gene Location: 127187-127972 bp Feature: domain Description: PRK10621 Location: 127196-127967 bp Feature: domain Description: PRK1 0621 Location: 1 271 96-1 27967 bp Feature: gene Location: 127902-128762 bp Feature: domain Description: LysR Location: 127908-128736 bp Feature: domain Description: LysR Location: 1 27908-1 28736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)