myRT

myRT report for GCA_002194305.1_ASM219430v1

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Seq: NGQV01000001.1 Vibrio cholerae O139 strain FC1817 NODE_1_length_770218_cov_45.2249_ID_1, whole genome shotgun sequence (770218 bp)
Overview 1 RT 1: 123500-128735 bp Neighborhood of RT #1 [123500, 128761] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123500-124117 bp Feature: domain Description: TIGR02646 Location: 123611-123995 bp Feature: domain Description: TIGR02646 Location: 1 2361 1 -1 23995 bp Feature: gene Location: 124130-125752 bp Feature: domain Description: COG3950 Location: 124316-125747 bp Feature: domain Description: COG3950 Location: 1 2431 6-1 25747 bp Feature: gene Location: 125753-126724 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125891-126488 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25891 -1 26488 bp Feature: gene Location: 127186-127971 bp Feature: domain Description: PRK10621 Location: 127195-127966 bp Feature: domain Description: PRK1 0621 Location: 1 271 95-1 27966 bp Feature: gene Location: 127901-128761 bp Feature: domain Description: LysR Location: 127907-128735 bp Feature: domain Description: LysR Location: 1 27907-1 28735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)