myRT

myRT report for GCA_002196035.1_ASM219603v1

Download annotations/find similar RTs

Seq: KZ209766.1 Escherichia coli N40607 genomic scaffold N40607_contig_17, whole genome shotgun sequence (126357 bp)
Overview 1 RT 1: 31999-35715 bp Neighborhood of RT #1 [31999, 35717] RVT-GII GIIM YhhI YhhI PRK01271 Feature: gene Location: 31999-32172 bp Feature: gene Location: 32267-32611 bp Feature: gene Location: 33137-34459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33413-34070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3341 3-34070 bp Feature: domain Description: GIIM Note: maturase Location: 34154-34364 bp Feature: domain Description: GIIM Note: maturase Location: 341 54-34364 bp Feature: gene Location: 34666-35457 bp Feature: domain Description: YhhI Location: 34669-35032 bp Feature: domain Description: YhhI Location: 34669-35032 bp Feature: domain Description: YhhI Location: 35089-35440 bp Feature: domain Description: YhhI Location: 35089-35440 bp Feature: gene Location: 35490-35717 bp Feature: domain Description: PRK01271 Location: 35493-35715 bp Feature: domain Description: PRK01 271 Location: 35493-3571 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433), PRK01271 (tautomerase PptA)

Seq: AZCG01000049.1 Escherichia coli N40607 N40607_contig_2_1, whole genome shotgun sequence (125999 bp)
Overview 1 RT 1: 78541-85952 bp Neighborhood of RT #1 [78541, 86008] InsE PHA02517 RVT-GII GIIM HsdM RMtype1_S_EcoEI-TRD1-CR1_like RMtype1_S_EcoEI-TRD1-CR1_like Feature: gene Location: 78541-78867 bp Feature: domain Description: InsE Location: 78544-78865 bp Feature: domain Description: InsE Location: 78544-78865 bp Feature: gene Location: 78867-79346 bp Feature: domain Description: PHA02517 Location: 78927-79281 bp Feature: domain Description: PHA02 517 Location: 7892 7-792 81 bp Feature: gene Location: 80280-81461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80286-80943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802 86-80943 bp Feature: domain Description: GIIM Note: maturase Location: 81018-81216 bp Feature: domain Description: GIIM Note: maturase Location: 81018-812 16 bp Feature: gene Location: 82268-84691 bp Feature: domain Description: HsdM Location: 82289-84233 bp Feature: domain Description: HsdM Location: 82 2 89-842 33 bp Feature: gene Location: 84716-86008 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 85049-85295 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 85049-852 95 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 85466-85952 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 85466-85952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HsdM (COG0286), RMtype1_S_EcoEI-TRD1-CR1_like (cd17260)