myRT

myRT report for GCA_002196055.1_ASM219605v1

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Seq: NIFH01000005.1 Vibrio cholerae strain P-18748 contig00005, whole genome shotgun sequence (207153 bp)
Overview 1 RT 1: 74532-80193 bp 2 RT 2: 169024-173700 bp Neighborhood of RT #1 [74532, 80240] PRK05096 RVT-Retrons Trypsin_2 PRK10590 Neighborhood of RT #2 [169024, 173915] Dam Dam phage_xxxx phage_xxxx RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 74532-75575 bp Feature: domain Description: PRK05096 Location: 74535-75567 bp Feature: domain Description: PRK05096 Location: 74535-75567 bp Feature: gene Location: 76017-76196 bp Feature: gene Location: 76212-77966 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76422-77025 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76422-77025 bp Feature: domain Description: Trypsin_2 Location: 77418-77850 bp Feature: domain Description: Trypsin_2 Location: 7741 8-77850 bp Feature: gene Location: 78539-78670 bp Feature: gene Location: 78846-80240 bp Feature: domain Description: PRK10590 Location: 78849-80193 bp Feature: domain Description: PRK1 0590 Location: 78849-801 93 bp Feature: gene Location: 169024-169656 bp Feature: domain Description: Dam Location: 169045-169186 bp Feature: domain Description: Dam Location: 1 69045-1 691 86 bp Feature: domain Description: Dam Location: 169285-169570 bp Feature: domain Description: Dam Location: 1 69285-1 69570 bp Feature: gene Location: 169658-170251 bp Feature: domain Description: phage_xxxx Location: 169670-169889 bp Feature: domain Description: phage_xxxx Location: 1 69670-1 69889 bp Feature: domain Description: phage_xxxx Location: 169976-170234 bp Feature: domain Description: phage_xxxx Location: 1 69976-1 70234 bp Feature: gene Location: 170509-171492 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 170659-171256 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 70659-1 71 256 bp Feature: gene Location: 171494-173113 bp Feature: domain Description: COG3950 Location: 171701-173042 bp Feature: domain Description: COG3950 Location: 1 71 701 -1 73042 bp Feature: gene Location: 173118-173915 bp Feature: domain Description: TIGR02646 Location: 173223-173700 bp Feature: domain Description: TIGR02646 Location: 1 73223-1 73700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05096 (guanosine 5'-monophosphate oxidoreductase; Provisional), RVT-Retrons, Trypsin_2 (pfam13365), PRK10590 (ATP-dependent RNA helicase RhlE; Provisional), Dam (pfam05869), phage_xxxx (TIGR02642), COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)