myRT

myRT report for GCA_002196785.1_ASM219678v1

Download annotations/find similar RTs

Seq: NAHZ01000012.1 Desulfosporosinus sp. FKA FKA_QYN_aSRB_scaffold_12, whole genome shotgun sequence (87492 bp)
Overview 1 RT 1: 15733-20087 bp Neighborhood of RT #1 [15733, 20134] Ntox28 Ser_Recombinase RVT-GII Resolvase Recombinase Zn_ribbon_recom Mn_catalase_like Feature: gene Location: 15733-16248 bp Feature: domain Description: Ntox28 Location: 15844-16021 bp Feature: domain Description: Ntox28 Location: 1 5844-1 6021 bp Feature: gene Location: 16441-16671 bp Feature: domain Description: Ser_Recombinase Location: 16513-16636 bp Feature: domain Description: Ser_Recombinase Location: 1 651 3-1 6636 bp Feature: gene Location: 17164-17793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17431-17782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7431 -1 7782 bp Feature: gene Location: 18138-19499 bp Feature: domain Description: Resolvase Location: 18141-18408 bp Feature: domain Description: Resolvase Location: 1 81 41 -1 8408 bp Feature: domain Description: Recombinase Location: 18477-18792 bp Feature: domain Description: Recombinase Location: 1 8477-1 8792 bp Feature: domain Description: Zn_ribbon_recom Location: 18858-19020 bp Feature: domain Description: Zn_ribbon_recom Location: 1 8858-1 9020 bp Feature: gene Location: 19571-20134 bp Feature: domain Description: Mn_catalase_like Location: 19628-20087 bp Feature: domain Description: Mn_catalase_like Location: 1 9628-20087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ntox28 (pfam15605), Ser_Recombinase (cl02788), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), Mn_catalase_like (cd07908)

Seq: NAHZ01000033.1 Desulfosporosinus sp. FKA FKA_QYN_aSRB_scaffold_33, whole genome shotgun sequence (413120 bp)
Overview 1 RT 1: 392593-397729 bp Neighborhood of RT #1 [392593, 398460] RVT-GII DUF3578 McrB DUF2357 PDDEXK_7 Feature: gene Location: 392593-392745 bp Feature: gene Location: 392821-393093 bp Feature: gene Location: 393263-393421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393275-393350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3932 75-393350 bp Feature: gene Location: 393837-396068 bp Feature: domain Description: DUF3578 Location: 394290-394821 bp Feature: domain Description: DUF3578 Location: 3942 90-39482 1 bp Feature: domain Description: McrB Location: 394944-395538 bp Feature: domain Description: McrB Location: 394944-395538 bp Feature: gene Location: 396040-398460 bp Feature: domain Description: DUF2357 Location: 396430-397180 bp Feature: domain Description: DUF2 357 Location: 396430-397180 bp Feature: domain Description: PDDEXK_7 Location: 397249-397729 bp Feature: domain Description: PDDEXK_7 Location: 3972 49-39772 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF3578 (pfam12102), McrB (COG4054), DUF2357 (pfam09823), PDDEXK_7 (pfam04411)

Seq: NAHZ01000005.1 Desulfosporosinus sp. FKA FKA_QYN_aSRB_scaffold_5, whole genome shotgun sequence (37134 bp)
Overview 1 RT 1: 538-3002 bp Neighborhood of RT #1 [538, 3013] RVT-GII group_II_RT_mat LysR Feature: gene Location: 538-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 793-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 793 -1240 bp Feature: gene Location: 1506-1847 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1521-1704 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1521-1704 bp Feature: gene Location: 2129-3013 bp Feature: domain Description: LysR Location: 2132-3002 bp Feature: domain Description: LysR Location: 213 2-3 002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), LysR (COG0583)