myRT

myRT report for GCA_002196855.1_ASM219685v1

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Seq: NIPW01000027.1 Haematobacter genomosp. 1 strain H2240 H2240_contig_28, whole genome shotgun sequence (186608 bp)
Overview 1 RT 1: 141524-149721 bp Neighborhood of RT #1 [141524, 149825] AlpA RVT-UG8 RVT-UG3 PRK13889 TraD Feature: gene Location: 141524-141781 bp Feature: gene Location: 141771-141989 bp Ori: OWJ76632.1 Feature: domain Description: AlpA Location: 141774-141948 bp Feature: domain Description: AlpA Location: 1 41 774-1 41 948 bp Feature: gene Location: 142686-144767 bp Ori: OWJ76633.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 143301-143757 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 43301 -1 43757 bp Feature: gene Location: 144760-146094 bp Ori: OWJ76670.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 145198-145678 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 451 98-1 45678 bp Feature: gene Location: 146364-149327 bp Ori: OWJ76671.1 Gene: traA Feature: domain Description: PRK13889 Location: 146367-149325 bp Feature: domain Description: PRK1 3889 Location: 1 46367-1 49325 bp Feature: gene Location: 149487-149825 bp Ori: OWJ76634.1 Feature: domain Description: TraD Location: 149547-149721 bp Feature: domain Description: TraD Location: 1 49547-1 49721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), RVT-UG8, RVT-UG3, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)