myRT

myRT report for GCA_002197985.1_ASM219798v1

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Seq: NBYK01000012.1 Pseudomonas aestusnigri strain VGXO14 scaffold00012, whole genome shotgun sequence (116555 bp)
Overview 1 RT 1: 1-3792 bp Neighborhood of RT #1 [1, 3869] RVT-Retrons TIR_2 HTH_MerR-like_sg6 Feature: gene Location: 1-438 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 157-430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 57-430 bp Feature: gene Location: 1827-2753 bp Feature: domain Description: TIR_2 Location: 2112-2412 bp Feature: domain Description: TIR_2 Location: 21 1 2-241 2 bp Feature: gene Location: 3435-3869 bp Feature: domain Description: HTH_MerR-like_sg6 Location: 3438-3792 bp Feature: domain Description: HTH_MerR-like_sg6 Location: 3438-3792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), HTH_MerR-like_sg6 (cd04781)

Seq: NBYK01000020.1 Pseudomonas aestusnigri strain VGXO14 scaffold00020, whole genome shotgun sequence (33847 bp)
Overview 1 RT 1: 6-3935 bp Neighborhood of RT #1 [6, 4213] RVT-Retrons YhaK LptA Feature: gene Location: 6-1328 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9-345 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9-345 bp Feature: gene Location: 1477-2361 bp Feature: domain Description: YhaK Location: 1510-2284 bp Feature: domain Description: YhaK Location: 1510-2 2 84 bp Feature: gene Location: 2498-4213 bp Feature: domain Description: LptA Location: 3188-3935 bp Feature: domain Description: LptA Location: 3188-3935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhaK (COG1741), LptA (COG1934), RVT-Retrons