myRT

myRT report for GCA_002198735.1_ASM219873v1

Download annotations/find similar RTs

Seq: MWLO01000135.1 Ideonella sp. A 288 EOINJALH_135, whole genome shotgun sequence (83012 bp)
Overview 1 RT 1: 29987-42018 bp Neighborhood of RT #1 [29987, 42038] TIR_2 WD40 WD40 COG5635 pfam03781 RVT-DGRs Avd_like YfmG Feature: gene Location: 29987-33178 bp Feature: domain Description: TIR_2 Location: 30080-30503 bp Feature: domain Description: TIR_2 Location: 30080-30503 bp Feature: domain Description: WD40 Location: 31565-32072 bp Feature: domain Description: WD40 Location: 31 565-32072 bp Feature: domain Description: WD40 Location: 32405-32978 bp Feature: domain Description: WD40 Location: 32405-32978 bp Feature: gene Location: 33299-36697 bp Feature: domain Description: COG5635 Location: 34154-34589 bp Feature: domain Description: COG5635 Location: 341 54-34589 bp Feature: domain Description: pfam03781 Location: 35762-36674 bp Feature: domain Description: pfam03781 Location: 35762-36674 bp Feature: gene Location: 36771-38195 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37323-37974 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37323-37974 bp Feature: gene Location: 37873-38229 bp Feature: domain Description: Avd_like Location: 37885-38194 bp Feature: domain Description: Avd_like Location: 37885-381 94 bp Feature: gene Location: 38667-42038 bp Feature: domain Description: YfmG Location: 41073-42018 bp Feature: domain Description: YfmG Location: 41 073-4201 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), WD40 (smart00320), COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)

Seq: MWLO01000003.1 Ideonella sp. A 288 EOINJALH_3, whole genome shotgun sequence (18308 bp)
Overview 1 RT 1: 1017-4341 bp Neighborhood of RT #1 [1017, 4341] RVT-GII Feature: gene Location: 1017-1463 bp Feature: gene Location: 1444-1992 bp Feature: gene Location: 2083-2304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2131-2299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 131-2 2 99 bp Feature: gene Location: 2136-2759 bp Feature: gene Location: 4057-4341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII