myRT

myRT report for GCA_002200015.1_ASM220001v1

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Seq: NIQX01000014.1 Bacillus cereus strain MOD1_Bc203 Bc203_contig_14, whole genome shotgun sequence (71663 bp)
Overview 1 RT 1: 18967-24973 bp Neighborhood of RT #1 [18967, 25005] RVT-GII YcjR Feature: gene Location: 18967-19362 bp Feature: gene Location: 19579-19863 bp Feature: gene Location: 20377-22359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20698-21433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20698-21 433 bp Feature: gene Location: 23571-23858 bp Feature: gene Location: 24037-25005 bp Feature: domain Description: YcjR Location: 24040-24973 bp Feature: domain Description: YcjR Location: 24040-24973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YcjR (COG1082)

Seq: NIQX01000031.1 Bacillus cereus strain MOD1_Bc203 Bc203_contig_31, whole genome shotgun sequence (34997 bp)
Overview 1 RT 1: 3128-5900 bp Neighborhood of RT #1 [3128, 5900] RVT-GII Feature: gene Location: 3128-3508 bp Feature: gene Location: 3568-3978 bp Feature: gene Location: 4423-4626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4435-4624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4435-462 4 bp Feature: gene Location: 5092-5334 bp Feature: gene Location: 5652-5900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQX01000040.1 Bacillus cereus strain MOD1_Bc203 Bc203_contig_40, whole genome shotgun sequence (63657 bp)
Overview 1 RT 1: 61211-63331 bp Neighborhood of RT #1 [61211, 63450] group_II_RT_mat RVT-GII HNHc Feature: gene Location: 61211-61366 bp Feature: gene Location: 61566-61853 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 61716-61830 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 61716-6183 0 bp Feature: gene Location: 61798-63450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61888-62626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61888-62626 bp Feature: domain Description: HNHc Note: nucleases Location: 63166-63331 bp Feature: domain Description: HNHc Note: nucleases Location: 63 166-63 3 3 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, HNHc (smart00507)

Seq: NIQX01000062.1 Bacillus cereus strain MOD1_Bc203 Bc203_contig_62, whole genome shotgun sequence (34043 bp)
Overview 1 RT 1: 16777-20253 bp Neighborhood of RT #1 [16777, 20253] NTP-PPase_RS21-C6_like RVT-Retrons DUF4870 Feature: gene Location: 16777-17103 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 16795-17044 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 16795-1704 4 bp Feature: gene Location: 17462-18187 bp Feature: gene Location: 18331-19164 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18457-19057 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 184 57-19057 bp Feature: gene Location: 19573-19998 bp Feature: domain Description: DUF4870 Location: 19702-19963 bp Feature: domain Description: DUF4 870 Location: 19702-19963 bp Feature: gene Location: 19999-20253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_RS21-C6_like (cd11537), RVT-Retrons, DUF4870 (pfam09685)

Seq: NIQX01000088.1 Bacillus cereus strain MOD1_Bc203 Bc203_contig_88, whole genome shotgun sequence (29311 bp)
Overview 1 RT 1: 17035-23102 bp Neighborhood of RT #1 [17035, 23125] YeiB Lysozyme_like RVT-GII Intron_maturas2 HNHc HK_WalK TMAO_torS Feature: gene Location: 17035-18264 bp Feature: domain Description: YeiB Location: 17173-18070 bp Feature: domain Description: YeiB Location: 17173-18070 bp Feature: gene Location: 18616-19032 bp Feature: domain Description: Lysozyme_like Location: 18742-19030 bp Feature: domain Description: Lysozyme_like Location: 18742-19030 bp Feature: gene Location: 19893-21026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20097-20301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20097-20301 bp Feature: domain Description: Intron_maturas2 Location: 20373-20718 bp Feature: domain Description: Intron_maturas2 Location: 20373-20718 bp Feature: domain Description: HNHc Note: nucleases Location: 20847-21000 bp Feature: domain Description: HNHc Note: nucleases Location: 20847-21000 bp Feature: gene Location: 21057-21224 bp Feature: gene Location: 21263-23125 bp Feature: domain Description: HK_WalK Location: 21809-22436 bp Feature: domain Description: HK_WalK Location: 21809-22436 bp Feature: domain Description: TMAO_torS Location: 22457-23102 bp Feature: domain Description: TMAO_torS Location: 2245 7-23102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeiB (COG2311), Lysozyme_like (pfam13702), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HK_WalK (NF033092), TMAO_torS (TIGR02956)

Seq: NIQX01000009.1 Bacillus cereus strain MOD1_Bc203 Bc203_contig_9, whole genome shotgun sequence (25066 bp)
Overview 1 RT 1: 11911-20664 bp Neighborhood of RT #1 [11911, 20741] TrbL TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 11911-15915 bp Feature: domain Description: TrbL Location: 12400-12673 bp Feature: domain Description: TrbL Location: 12400-126 73 bp Feature: gene Location: 15946-16905 bp Feature: domain Description: TraC-F-type Location: 15964-16744 bp Feature: domain Description: TraC-F-type Location: 1596 4-16 744 bp Feature: gene Location: 17208-19040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17508-18213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17508-18213 bp Feature: domain Description: HNHc Note: nucleases Location: 18777-18924 bp Feature: domain Description: HNHc Note: nucleases Location: 18777-18924 bp Feature: gene Location: 19397-19570 bp Feature: gene Location: 19770-20741 bp Feature: domain Description: TraC-F-type Location: 20190-20664 bp Feature: domain Description: TraC-F-type Location: 20190-206 6 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)