myRT

myRT report for GCA_002200055.1_ASM220005v1

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Seq: NIQY01000110.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_110, whole genome shotgun sequence (13452 bp)
Overview 1 RT 1: 7423-13451 bp Neighborhood of RT #1 [7423, 13451] Ftsk_gamma RVT-GII GIIM HNHc Feature: gene Location: 7423-8196 bp Feature: gene Location: 8465-10147 bp Feature: domain Description: Ftsk_gamma Location: 9092-9272 bp Feature: domain Description: Ftsk_gamma Location: 9092-9272 bp Feature: gene Location: 10488-12362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10788-11493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0788-1 1 493 bp Feature: domain Description: GIIM Note: maturase Location: 11607-11775 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 607-1 1 775 bp Feature: domain Description: HNHc Note: nucleases Location: 12123-12288 bp Feature: domain Description: HNHc Note: nucleases Location: 1 21 23-1 2288 bp Feature: gene Location: 13035-13451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NIQY01000130.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_130, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 100-1753 bp Neighborhood of RT #1 [100, 1869] RVT-GII HNHc Feature: gene Location: 100-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NIQY01000148.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_148, whole genome shotgun sequence (5299 bp)
Overview 1 RT 1: 613-5068 bp Neighborhood of RT #1 [613, 5193] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 613-2436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883 -1711 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: Intron_maturas2 Location: 1783 -2101 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: gene Location: 2575-2721 bp Feature: gene Location: 3403-5193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 700-43 96 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Feature: domain Description: HNHc Note: nucleases Location: 493 6-5068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NIQY01000016.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_16, whole genome shotgun sequence (66043 bp)
Overview 1 RT 1: 34778-42007 bp Neighborhood of RT #1 [34778, 42007] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 34778-35005 bp Feature: gene Location: 35077-35985 bp Feature: gene Location: 36732-38597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37032-37737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37032-37737 bp Feature: domain Description: GIIM Note: maturase Location: 37824-38007 bp Feature: domain Description: GIIM Note: maturase Location: 37824 -38007 bp Feature: gene Location: 38875-41277 bp Feature: domain Description: KOG1000 Location: 39583-39799 bp Feature: domain Description: KOG1000 Location: 39583-39799 bp Feature: domain Description: KOG1000 Location: 40402-40735 bp Feature: domain Description: KOG1000 Location: 4 04 02-4 0735 bp Feature: gene Location: 41294-42007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: NIQY01000191.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_191, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 94-2420 bp Neighborhood of RT #1 [94, 2420] RVT-GII HNHc Feature: gene Location: 94-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 2-105 7 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-175 3 bp Feature: gene Location: 2202-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NIQY01000213.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_213, whole genome shotgun sequence (13857 bp)
Overview 1 RT 1: 4767-13855 bp Neighborhood of RT #1 [4767, 13855] RapH_N TPR TPR PRK13922 AE_Prim_S_like RVT-UG10 Feature: gene Location: 4767-5858 bp Feature: domain Description: RapH_N Location: 4788-4959 bp Feature: domain Description: RapH_N Location: 4788-4959 bp Feature: domain Description: TPR Location: 5094-5361 bp Feature: domain Description: TPR Location: 5094-536 1 bp Feature: domain Description: TPR Location: 5406-5817 bp Feature: domain Description: TPR Location: 5406 -5817 bp Feature: gene Location: 6321-6548 bp Feature: domain Description: PRK13922 Location: 6408-6528 bp Feature: domain Description: PRK13922 Location: 6 408-6 528 bp Feature: gene Location: 6824-12463 bp Feature: domain Description: AE_Prim_S_like Location: 7034-7253 bp Feature: domain Description: AE_Prim_S_like Location: 7034-7253 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8240-8894 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8240-8894 bp Feature: gene Location: 12902-13327 bp Feature: gene Location: 13337-13855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RapH_N (pfam18801), TPR (smart00028), PRK13922 (rod shape-determining protein MreC; Provisional), AE_Prim_S_like (cl01287), RVT-UG10

Seq: NIQY01000215.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_215, whole genome shotgun sequence (1006 bp)
Overview 1 RT 1: 182-1000 bp Neighborhood of RT #1 [182, 1005] RVT-GII Feature: gene Location: 182-361 bp Feature: gene Location: 511-1005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 820-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 820-1000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQY01000022.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_22, whole genome shotgun sequence (1692 bp)
Overview 1 RT 1: 1-1523 bp Neighborhood of RT #1 [1, 1523] RVT-GII GIIM Feature: gene Location: 1-1194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310-949 bp Feature: domain Description: GIIM Note: maturase Location: 1024-1192 bp Feature: domain Description: GIIM Note: maturase Location: 1024-1192 bp Feature: gene Location: 1344-1523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NIQY01000034.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_34, whole genome shotgun sequence (14133 bp)
Overview 1 RT 1: 7995-14132 bp Neighborhood of RT #1 [7995, 14132] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM Feature: gene Location: 7995-8978 bp Feature: domain Description: rpsA Location: 8262-8799 bp Feature: domain Description: rpsA Location: 8262-879 9 bp Feature: gene Location: 9237-10937 bp Feature: domain Description: TraG-D_C Location: 9249-9567 bp Feature: domain Description: TraG-D_C Location: 9 249 -9 567 bp Feature: domain Description: Ftsk_gamma Location: 9927-10107 bp Feature: domain Description: Ftsk_gamma Location: 9 9 27-10107 bp Feature: domain Description: Ftsk_gamma Location: 10260-10434 bp Feature: domain Description: Ftsk_gamma Location: 10260-10434 bp Feature: gene Location: 11170-13044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11470-12175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11470-12175 bp Feature: domain Description: GIIM Note: maturase Location: 12289-12457 bp Feature: domain Description: GIIM Note: maturase Location: 12289 -12457 bp Feature: gene Location: 13716-14132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388)

Seq: NIQY01000048.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_48, whole genome shotgun sequence (2705 bp)
Overview 1 RT 1: 159-2311 bp Neighborhood of RT #1 [159, 2311] RVT-GII HNHc Feature: gene Location: 159-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: gene Location: 2129-2311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NIQY01000054.1 Bacillus cereus strain MOD1_Bc235 Bc235_contig_54, whole genome shotgun sequence (16248 bp)
Overview 1 RT 1: 13001-15836 bp Neighborhood of RT #1 [13001, 15859] NlpD Spr RVT-GII Intron_maturas2 HNHc Feature: gene Location: 13001-13876 bp Feature: domain Description: NlpD Location: 13016-13445 bp Feature: domain Description: NlpD Location: 13016-13445 bp Feature: domain Description: Spr Location: 13481-13817 bp Feature: domain Description: Spr Location: 13481-13817 bp Feature: gene Location: 13900-14034 bp Feature: gene Location: 14036-15859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14300-15134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14300-15134 bp Feature: domain Description: Intron_maturas2 Location: 15203-15542 bp Feature: domain Description: Intron_maturas2 Location: 15203-15542 bp Feature: domain Description: HNHc Note: nucleases Location: 15680-15836 bp Feature: domain Description: HNHc Note: nucleases Location: 15680-15836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)