myRT

myRT report for GCA_002200175.1_ASM220017v1

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Seq: NIRB01000101.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_101, whole genome shotgun sequence (14051 bp)
Overview 1 RT 1: 194-9244 bp Neighborhood of RT #1 [194, 9285] AE_Prim_S_like RVT-UG10 PRK13922 RapH_N TPR TPR Feature: gene Location: 194-715 bp Feature: gene Location: 725-1150 bp Feature: gene Location: 1589-7228 bp Feature: domain Description: AE_Prim_S_like Location: 1799-2018 bp Feature: domain Description: AE_Prim_S_like Location: 1 799-201 8 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 3005-3659 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 3005-3659 bp Feature: gene Location: 7504-7731 bp Feature: domain Description: PRK13922 Location: 7591-7711 bp Feature: domain Description: PRK1 3922 Location: 7591 -771 1 bp Feature: gene Location: 8194-9285 bp Feature: domain Description: RapH_N Location: 8215-8386 bp Feature: domain Description: RapH_N Location: 821 5-8386 bp Feature: domain Description: TPR Location: 8521-8788 bp Feature: domain Description: TPR Location: 8521 -8788 bp Feature: domain Description: TPR Location: 8833-9244 bp Feature: domain Description: TPR Location: 8833-9244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional), RapH_N (pfam18801), TPR (smart00028)

Seq: NIRB01000118.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_118, whole genome shotgun sequence (5299 bp)
Overview 1 RT 1: 613-5068 bp Neighborhood of RT #1 [613, 5193] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 613-2436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: Intron_maturas2 Location: 1783-2 101 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 54-2 407 bp Feature: gene Location: 2575-2721 bp Feature: gene Location: 3403-5193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NIRB01000181.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_181, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 94-2420 bp Neighborhood of RT #1 [94, 2420] RVT-GII HNHc Feature: gene Location: 94-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 52-1057 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: gene Location: 2202-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NIRB01000191.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_191, whole genome shotgun sequence (1950 bp)
Overview 1 RT 1: 2-1502 bp Neighborhood of RT #1 [2, 1561] RVT-GII Intron_maturas2 Feature: gene Location: 2-1561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-1100 bp Feature: domain Description: Intron_maturas2 Location: 1169-1502 bp Feature: domain Description: Intron_maturas2 Location: 1169-1502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: NIRB01000207.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_207, whole genome shotgun sequence (13452 bp)
Overview 1 RT 1: 7423-13451 bp Neighborhood of RT #1 [7423, 13451] Ftsk_gamma RVT-GII GIIM HNHc Feature: gene Location: 7423-8196 bp Feature: gene Location: 8465-10147 bp Feature: domain Description: Ftsk_gamma Location: 9092-9272 bp Feature: domain Description: Ftsk_gamma Location: 9092-9272 bp Feature: gene Location: 10488-12362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10788-11493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10788-11493 bp Feature: domain Description: GIIM Note: maturase Location: 11607-11775 bp Feature: domain Description: GIIM Note: maturase Location: 11607-11775 bp Feature: domain Description: HNHc Note: nucleases Location: 12123-12288 bp Feature: domain Description: HNHc Note: nucleases Location: 12123-12288 bp Feature: gene Location: 13035-13451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NIRB01000032.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_32, whole genome shotgun sequence (66580 bp)
Overview 1 RT 1: 34778-42007 bp Neighborhood of RT #1 [34778, 42007] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 34778-35005 bp Feature: gene Location: 35077-35985 bp Feature: gene Location: 36732-38597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37032-37737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37032-37737 bp Feature: domain Description: GIIM Note: maturase Location: 37824-38007 bp Feature: domain Description: GIIM Note: maturase Location: 37824-38007 bp Feature: gene Location: 38875-41277 bp Feature: domain Description: KOG1000 Location: 39583-39799 bp Feature: domain Description: KOG1000 Location: 39583-39799 bp Feature: domain Description: KOG1000 Location: 40402-40735 bp Feature: domain Description: KOG1000 Location: 40402-40735 bp Feature: gene Location: 41294-42007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: NIRB01000058.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_58, whole genome shotgun sequence (2129 bp)
Overview 1 RT 1: 217-1877 bp Neighborhood of RT #1 [217, 1877] RVT-GII GIIM Feature: gene Location: 217-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526-1165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526-1165 bp Feature: domain Description: GIIM Note: maturase Location: 1240-1465 bp Feature: domain Description: GIIM Note: maturase Location: 1240-1465 bp Feature: gene Location: 1698-1877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NIRB01000059.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_59, whole genome shotgun sequence (945 bp)
Overview 1 RT 1: 3-909 bp Neighborhood of RT #1 [3, 923] RVT-GII Feature: gene Location: 3-923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312-909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIRB01000064.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_64, whole genome shotgun sequence (8877 bp)
Overview 1 RT 1: 159-3767 bp Neighborhood of RT #1 [159, 3767] RVT-GII HNHc Feature: gene Location: 159-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: domain Description: HNHc Note: nucleases Location: 1749 -1824 bp Feature: gene Location: 2129-2347 bp Feature: gene Location: 2676-3767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NIRB01000072.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_72, whole genome shotgun sequence (2804 bp)
Overview 1 RT 1: 296-1949 bp Neighborhood of RT #1 [296, 2065] RVT-GII HNHc Feature: gene Location: 296-2065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554-1250 bp Feature: domain Description: HNHc Note: nucleases Location: 1811-1949 bp Feature: domain Description: HNHc Note: nucleases Location: 1811-1949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NIRB01000091.1 Bacillus cereus strain MOD1_Bc231 Bc231_contig_91, whole genome shotgun sequence (22998 bp)
Overview 1 RT 1: 2-5960 bp Neighborhood of RT #1 [2, 6139] RVT-GII GIIM Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 2-418 bp Feature: gene Location: 1090-2964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390-2095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1390-2095 bp Feature: domain Description: GIIM Note: maturase Location: 2209-2377 bp Feature: domain Description: GIIM Note: maturase Location: 2209-2377 bp Feature: gene Location: 3338-4897 bp Feature: domain Description: Ftsk_gamma Location: 3887-4067 bp Feature: domain Description: Ftsk_gamma Location: 3887-4067 bp Feature: domain Description: Ftsk_gamma Location: 4220-4394 bp Feature: domain Description: Ftsk_gamma Location: 4220-4394 bp Feature: gene Location: 5156-6139 bp Feature: domain Description: rpsA Location: 5423-5960 bp Feature: domain Description: rpsA Location: 5423-5960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Ftsk_gamma (smart00843), rpsA (TIGR00717)