myRT

myRT report for GCA_002200855.1_ASM220085v1

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Seq: AVCZ01000136.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 strain 4400831 contig120, whole genome shotgun sequence (575 bp)
Overview 1 RT 1: 154-565 bp Neighborhood of RT #1 [154, 573] RVT-GII Feature: gene Location: 154-573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478-565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478-565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AVCZ01000128.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 strain 4400831 contig121, whole genome shotgun sequence (735 bp)
Overview 1 RT 1: 1-724 bp Neighborhood of RT #1 [1, 732] RVT-GII GIIM Feature: gene Location: 1-732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-469 bp Feature: domain Description: GIIM Note: maturase Location: 526-724 bp Feature: domain Description: GIIM Note: maturase Location: 52 6-72 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AVCZ01000115.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 strain 4400831 contig124, whole genome shotgun sequence (1111 bp)
Overview 1 RT 1: 2-1109 bp Neighborhood of RT #1 [2, 1108] RVT-GII GIIM Feature: gene Location: 2-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236-851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 6-851 bp Feature: domain Description: GIIM Note: maturase Location: 911-1109 bp Feature: domain Description: GIIM Note: maturase Location: 911-1109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AVCZ01000126.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 strain 4400831 contig135, whole genome shotgun sequence (743 bp)
Overview 1 RT 1: 87-585 bp Neighborhood of RT #1 [87, 740] RVT-GII GIIM Feature: gene Location: 87-740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90-303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90-303 bp Feature: domain Description: GIIM Note: maturase Location: 357-585 bp Feature: domain Description: GIIM Note: maturase Location: 357-585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AVCZ01000152.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 strain 4400831 contig162, whole genome shotgun sequence (372 bp)
Overview 1 RT 1: 2-371 bp Neighborhood of RT #1 [2, 370] RVT-GII Feature: gene Location: 2-370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AVCZ01000019.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 strain 4400831 contig21, whole genome shotgun sequence (72525 bp)
Overview 1 RT 1: 21330-27431 bp Neighborhood of RT #1 [21330, 27445] PRK13922 PRK13927 RVT-GII Intron_maturas2 HNHc RadC Maf Feature: gene Location: 21330-22220 bp Feature: domain Description: PRK13922 Location: 21342-22158 bp Feature: domain Description: PRK13922 Location: 21342-22158 bp Feature: gene Location: 22233-23252 bp Feature: domain Description: PRK13927 Location: 22245-23238 bp Feature: domain Description: PRK13927 Location: 22245-23238 bp Feature: gene Location: 23823-25712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24093-24933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24093-24933 bp Feature: domain Description: Intron_maturas2 Location: 25044-25296 bp Feature: domain Description: Intron_maturas2 Location: 25044-25296 bp Feature: domain Description: HNHc Note: nucleases Location: 25494-25656 bp Feature: domain Description: HNHc Note: nucleases Location: 25494-256 56 bp Feature: gene Location: 26266-26835 bp Feature: domain Description: RadC Location: 26305-26824 bp Feature: domain Description: RadC Location: 26 305-26 824 bp Feature: gene Location: 26852-27445 bp Feature: domain Description: Maf Location: 26876-27431 bp Feature: domain Description: Maf Location: 26 876 -27431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RadC (pfam04002), Maf (pfam02545)

Seq: AVCZ01000004.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 strain 4400831 contig4, whole genome shotgun sequence (142610 bp)
Overview 1 RT 1: 99605-105232 bp Neighborhood of RT #1 [99605, 105276] PRK06352 MFS_SV2_like RVT-GII GIIM RpiR Feature: gene Location: 99605-100657 bp Feature: domain Description: PRK06352 Location: 99608-100625 bp Feature: domain Description: PRK06352 Location: 99608-100625 bp Feature: gene Location: 101016-102260 bp Feature: domain Description: MFS_SV2_like Location: 101082-102219 bp Feature: domain Description: MFS_SV2_like Location: 101082-102219 bp Feature: gene Location: 102834-103754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103065-103683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103065-103683 bp Feature: gene Location: 103775-104131 bp Feature: domain Description: GIIM Note: maturase Location: 103790-103970 bp Feature: domain Description: GIIM Note: maturase Location: 1037 90-10397 0 bp Feature: gene Location: 104389-105276 bp Feature: domain Description: RpiR Location: 104416-105232 bp Feature: domain Description: RpiR Location: 104416-105232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_SV2_like (cd17316), RVT-GII, GIIM (pfam08388), RpiR (COG1737), PRK06352 (threonine synthase; Validated)

Seq: AVCZ01000034.1 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 strain 4400831 contig43, whole genome shotgun sequence (37932 bp)
Overview 1 RT 1: 7873-14454 bp Neighborhood of RT #1 [7873, 14516] HTH_ARSR group_II_RT_mat HNHc RVT-GII GIIM RVT-GII COG5 Feature: gene Location: 7873-8220 bp Feature: domain Description: HTH_ARSR Location: 7921-8146 bp Feature: domain Description: HTH_ARSR Location: 7921-8 146 bp Feature: gene Location: 8629-9405 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8647-8842 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8 647-8 8 42 bp Feature: domain Description: HNHc Note: nucleases Location: 9154-9292 bp Feature: domain Description: HNHc Note: nucleases Location: 9154-9292 bp Feature: gene Location: 9665-10909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9869-10523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98 69-10523 bp Feature: domain Description: GIIM Note: maturase Location: 10604-10823 bp Feature: domain Description: GIIM Note: maturase Location: 10604-108 23 bp Feature: gene Location: 11425-12294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11716-12268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11716-12268 bp Feature: gene Location: 13314-13715 bp Feature: gene Location: 13716-14516 bp Feature: domain Description: COG5 Location: 14241-14454 bp Feature: domain Description: COG5 Location: 14241-14454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_ARSR (smart00418), group_II_RT_mat (TIGR04416), HNHc (smart00507), GIIM (pfam08388), COG5