myRT

myRT report for GCA_002201405.1_ASM220140v1

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Seq: NIJB01000015.1 Pseudomonas aeruginosa strain PAS4 PAS4_Contig_15, whole genome shotgun sequence (130403 bp)
Overview 1 RT 1: 37270-40495 bp Neighborhood of RT #1 [37270, 40495] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 37270-37854 bp Feature: domain Description: DUF1566 Location: 37552-37840 bp Feature: domain Description: DUF1 566 Location: 37552-37840 bp Feature: gene Location: 37893-38249 bp Feature: domain Description: Avd_like Location: 37920-38223 bp Feature: domain Description: Avd_like Location: 37920-38223 bp Feature: gene Location: 38522-39661 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38699-39383 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38699-39383 bp Feature: gene Location: 39964-40269 bp Feature: gene Location: 40301-40495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: NIJB01000006.1 Pseudomonas aeruginosa strain PAS4 PAS4_Contig_6, whole genome shotgun sequence (196840 bp)
Overview 1 RT 1: 161882-167733 bp Neighborhood of RT #1 [161882, 167840] DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF conj_PilL Feature: gene Location: 161882-162193 bp Feature: gene Location: 162331-163386 bp Feature: domain Description: DEXHc_Snf Location: 162550-162811 bp Feature: domain Description: DEXHc_Snf Location: 162 550-162 811 bp Feature: gene Location: 163983-165701 bp Feature: RT Description: RVT_N Location: 164040-164277 bp Feature: RT Description: RVT_N Location: 164040-1642 77 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164328-164979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16432 8-164979 bp Feature: domain Description: GIIM Note: maturase Location: 165033-165264 bp Feature: domain Description: GIIM Note: maturase Location: 165033-1652 64 bp Feature: domain Description: HNHc Note: nucleases Location: 165498-165654 bp Feature: domain Description: HNHc Note: nucleases Location: 165498-165654 bp Feature: gene Location: 165868-167028 bp Feature: domain Description: SF2_C_SNF Location: 166468-166864 bp Feature: domain Description: SF2 _C_SNF Location: 166468-166864 bp Feature: gene Location: 167262-167840 bp Feature: domain Description: conj_PilL Location: 167424-167733 bp Feature: domain Description: conj_PilL Location: 16742 4-167733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXHc_Snf (cd17919), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), SF2_C_SNF (cd18793), conj_PilL (TIGR03748)