myRT

myRT report for GCA_002201455.1_ASM220145v1

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Seq: NIJE01000105.1 Pseudomonas aeruginosa strain PAS1 PAS1_Contig_105, whole genome shotgun sequence (5236 bp)
Overview 1 RT 1: 258-3243 bp Neighborhood of RT #1 [258, 3257] DUF551 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 258-563 bp Feature: gene Location: 580-843 bp Feature: domain Description: DUF551 Location: 589-835 bp Feature: domain Description: DUF551 Location: 589-835 bp Feature: gene Location: 866-2005 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1043-1727 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 043-1 727 bp Feature: gene Location: 2278-2634 bp Feature: domain Description: Avd_like Location: 2305-2608 bp Feature: domain Description: Avd_like Location: 2305-2608 bp Feature: gene Location: 2673-3257 bp Feature: domain Description: DUF1566 Location: 2955-3243 bp Feature: domain Description: DUF1 566 Location: 2955-3243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), DUF1566 (pfam07603), DUF551 (pfam04448), RVT-DGRs

Seq: NIJE01000121.1 Pseudomonas aeruginosa strain PAS1 PAS1_Contig_121, whole genome shotgun sequence (2426 bp)
Overview 1 RT 1: 1-2292 bp Neighborhood of RT #1 [1, 2339] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-192 bp Feature: gene Location: 223-351 bp Feature: gene Location: 621-2339 bp Feature: RT Description: RVT_N Location: 678-915 bp Feature: RT Description: RVT_N Location: 678-915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1617 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1902 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1902 bp Feature: domain Description: HNHc Note: nucleases Location: 2136-2292 bp Feature: domain Description: HNHc Note: nucleases Location: 2 136-2 2 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NIJE01000291.1 Pseudomonas aeruginosa strain PAS1 PAS1_Contig_291, whole genome shotgun sequence (216 bp)
Overview 1 RT 1: 3-213 bp Neighborhood of RT #1 [3, 215] RVT-GII Feature: gene Location: 3-215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIJE01000297.1 Pseudomonas aeruginosa strain PAS1 PAS1_Contig_297, whole genome shotgun sequence (211 bp)
Overview 1 RT 1: 1-211 bp Neighborhood of RT #1 [1, 210] RVT-GII Feature: gene Location: 1-210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII