myRT

myRT report for GCA_002201475.1_ASM220147v1

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Seq: CP021422.1 Acutalibacter muris strain KB18 genome (3802913 bp)
Overview 1 RT 1: 202904-206328 bp 2 RT 2: 2994377-2998058 bp 3 RT 3: 3015983-3019345 bp 4 RT 4: 3128928-3132692 bp Neighborhood of RT #1 [202904, 206342] PHA02517 RVT_N RVT-GII GIIM T_den_put_tspse Neighborhood of RT #2 [2994377, 2998072] RVT-DGRs ChiA1_BD ChiA1_BD Neighborhood of RT #3 [3015983, 3019425] HTH_Tnp_1 RVT-GII HNHc TraG-D_C HTH_36 Neighborhood of RT #4 [3128928, 3132692] PRTase_2 MntR RVT-Retrons Feature: gene Location: 202904-203338 bp Feature: domain Description: PHA02517 Location: 202916-203306 bp Feature: domain Description: PHA0251 7 Location: 20291 6-203306 bp Feature: gene Location: 203564-204166 bp Feature: RT Description: RVT_N Location: 203798-204029 bp Feature: RT Description: RVT_N Location: 203798-204029 bp Feature: gene Location: 204111-204971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204243-204714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204243-20471 4 bp Feature: domain Description: GIIM Note: maturase Location: 204777-204969 bp Feature: domain Description: GIIM Note: maturase Location: 204777-204969 bp Feature: gene Location: 205282-205722 bp Feature: gene Location: 205737-206342 bp Feature: domain Description: T_den_put_tspse Location: 205740-206328 bp Feature: domain Description: T_den_put_tspse Location: 205740-206328 bp Feature: gene Location: 2994377-2995312 bp Feature: gene Location: 2995418-2995918 bp Feature: gene Location: 2996195-2997199 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2996330-2997065 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2996330-2997065 bp Feature: gene Location: 2997311-2997631 bp Feature: gene Location: 2997635-2998072 bp Feature: domain Description: ChiA1_BD Location: 2997752-2997899 bp Feature: domain Description: ChiA1 _BD Location: 2997752-2997899 bp Feature: domain Description: ChiA1_BD Location: 2997953-2998058 bp Feature: domain Description: ChiA1 _BD Location: 2997953-2998058 bp Feature: gene Location: 3015983-3016585 bp Feature: gene Location: 3016957-3017193 bp Feature: domain Description: HTH_Tnp_1 Location: 3016987-3017116 bp Feature: domain Description: HTH_Tnp_1 Location: 301 6987-301 71 1 6 bp Feature: gene Location: 3017076-3018341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3017148-3017514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 71 48-301 751 4 bp Feature: domain Description: HNHc Note: nucleases Location: 3018081-3018222 bp Feature: domain Description: HNHc Note: nucleases Location: 301 8081 -301 8222 bp Feature: gene Location: 3018390-3019178 bp Feature: domain Description: TraG-D_C Location: 3018480-3018801 bp Feature: domain Description: TraG-D_C Location: 301 8480-301 8801 bp Feature: gene Location: 3019165-3019425 bp Feature: domain Description: HTH_36 Location: 3019201-3019345 bp Feature: domain Description: HTH_36 Location: 301 9201 -301 9345 bp Feature: gene Location: 3128928-3129863 bp Feature: domain Description: PRTase_2 Location: 3129285-3129516 bp Feature: domain Description: PRTase_2 Location: 31 29285-31 2951 6 bp Feature: gene Location: 3129856-3130182 bp Feature: domain Description: MntR Location: 3129886-3130063 bp Feature: domain Description: MntR Location: 31 29886-31 30063 bp Feature: gene Location: 3130417-3131442 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3130648-3131200 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 30648-31 31 200 bp Feature: gene Location: 3131446-3132048 bp Feature: gene Location: 3132216-3132692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), T_den_put_tspse (TIGR01784), RVT-DGRs, ChiA1_BD (cd12214), HTH_Tnp_1 (pfam01527), HNHc (smart00507), TraG-D_C (pfam12696)
HTH_36 (pfam13730), PRTase_2 (pfam15609), MntR (COG1321), RVT-Retrons