myRT

myRT report for GCA_002201735.1_ASM220173v1

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Seq: NISH01000026.1 Mycobacterium avium subsp. hominissuis strain 11 contig26, whole genome shotgun sequence (49504 bp)
Overview 1 RT 1: 3939-7431 bp Neighborhood of RT #1 [3939, 7469] RVT-GII GIIM rve TetR_N TetR_C_35 Feature: gene Location: 3939-4154 bp Feature: gene Location: 4523-4681 bp Feature: gene Location: 4684-6132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5002-5689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5002-5689 bp Feature: domain Description: GIIM Note: maturase Location: 5764-5959 bp Feature: domain Description: GIIM Note: maturase Location: 5764-5959 bp Feature: gene Location: 6267-6548 bp Feature: domain Description: rve Location: 6273-6393 bp Feature: domain Description: rve Location: 6273-6393 bp Feature: gene Location: 6840-7469 bp Feature: domain Description: TetR_N Location: 6897-7029 bp Feature: domain Description: TetR_N Location: 6897-7029 bp Feature: domain Description: TetR_C_35 Location: 7098-7431 bp Feature: domain Description: TetR_C_35 Location: 7098-7431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rve (pfam00665), TetR_N (pfam00440), TetR_C_35 (pfam18556)

Seq: NISH01000046.1 Mycobacterium avium subsp. hominissuis strain 11 contig46, whole genome shotgun sequence (3130 bp)
Overview 1 RT 1: 127-2672 bp Neighborhood of RT #1 [127, 2701] Transposase_mut RVT-GII GIIM Tra8 Feature: gene Location: 127-348 bp Feature: domain Description: Transposase_mut Location: 130-250 bp Feature: domain Description: Transposase_mut Location: 130-2 50 bp Feature: gene Location: 616-2127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 997-1681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 997-1681 bp Feature: domain Description: GIIM Note: maturase Location: 1756-1972 bp Feature: domain Description: GIIM Note: maturase Location: 1756-1972 bp Feature: gene Location: 2300-2701 bp Feature: domain Description: Tra8 Location: 2312-2672 bp Feature: domain Description: Tra8 Location: 2 312 -2 672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), Tra8 (COG2826), RVT-GII, GIIM (pfam08388)