myRT

myRT report for GCA_002205015.1_ASM220501v1

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Seq: NIZI01000137.1 Klebsiella pneumoniae strain 852K NODE_216_length_132897_cov_45.502277, whole genome shotgun sequence (132983 bp)
Overview 1 RT 1: 31674-39055 bp Neighborhood of RT #1 [31674, 39072] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31674-32912 bp Feature: domain Description: PRK09692 Location: 31680-32862 bp Feature: domain Description: PRK09692 Location: 31 680-32862 bp Feature: gene Location: 33092-33547 bp Ori: OWQ06208.1 Feature: domain Description: Integrase_1 Location: 33095-33329 bp Feature: domain Description: Integrase_1 Location: 33095-33329 bp Feature: gene Location: 33589-35670 bp Ori: OWQ06209.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34000-34444 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34000-34444 bp Feature: gene Location: 35667-38261 bp Ori: OWQ06210.1 Feature: domain Description: FimD Location: 35709-38250 bp Feature: domain Description: FimD Location: 35709-38250 bp Feature: gene Location: 38308-39072 bp Ori: OWQ06211.1 Feature: domain Description: FimC Location: 38353-39055 bp Feature: domain Description: FimC Location: 38353-39055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NIZI01000140.1 Klebsiella pneumoniae strain 852K NODE_219_length_9212_cov_21.911963, whole genome shotgun sequence (9298 bp)
Overview 1 RT 1: 7601-8906 bp Neighborhood of RT #1 [7601, 9298] RVT-GII Feature: gene Location: 7601-7813 bp Feature: gene Location: 7983-8213 bp Feature: gene Location: 8447-9298 bp Ori: OWQ05917.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8453-8906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8453-8906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIZI01000047.1 Klebsiella pneumoniae strain 852K NODE_69_length_1051_cov_63.328259, whole genome shotgun sequence (1137 bp)
Overview 1 RT 1: 1-1137 bp Neighborhood of RT #1 [1, 1137] RVT-GII Feature: gene Location: 1-767 bp Ori: OWQ14162.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403 -763 bp Feature: gene Location: 900-1137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIZI01000202.1 Klebsiella pneumoniae strain 852K NODE_373_length_1126_cov_37.316162, whole genome shotgun sequence (1212 bp)
Overview 1 RT 1: 98-1127 bp Neighborhood of RT #1 [98, 1126] RVT-GII GIIM Feature: gene Location: 98-1126 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290-914 bp Feature: domain Description: GIIM Note: maturase Location: 953-1127 bp Feature: domain Description: GIIM Note: maturase Location: 953-1127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NIZI01000027.1 Klebsiella pneumoniae strain 852K NODE_43_length_665_cov_375.329315, whole genome shotgun sequence (751 bp)
Overview 1 RT 1: 59-359 bp Neighborhood of RT #1 [59, 751] RVT-GII Feature: gene Location: 59-751 bp Ori: OWQ15794.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62-359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62-35 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIZI01000012.1 Klebsiella pneumoniae strain 852K NODE_14_length_1141_cov_396.468018, whole genome shotgun sequence (1227 bp)
Overview 1 RT 1: 1-1129 bp Neighborhood of RT #1 [1, 1129] RVT-GII Feature: gene Location: 1-878 bp Ori: OWQ16798.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-86 2 bp Feature: gene Location: 878-1129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII