myRT

myRT report for GCA_002205025.1_ASM220502v1

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Seq: NIZK01000288.1 Klebsiella pneumoniae strain 852 NODE_472_length_89940_cov_32.057850, whole genome shotgun sequence (90036 bp)
Overview 1 RT 1: 31684-39065 bp Neighborhood of RT #1 [31684, 39082] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31684-32922 bp Feature: domain Description: PRK09692 Location: 31690-32872 bp Feature: domain Description: PRK09692 Location: 31 690-32872 bp Feature: gene Location: 33102-33557 bp Ori: OWQ16724.1 Feature: domain Description: Integrase_1 Location: 33105-33339 bp Feature: domain Description: Integrase_1 Location: 331 05-33339 bp Feature: gene Location: 33599-35680 bp Ori: OWQ16725.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34010-34454 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3401 0-34454 bp Feature: gene Location: 35677-38271 bp Ori: OWQ16726.1 Feature: domain Description: FimD Location: 35719-38260 bp Feature: domain Description: FimD Location: 3571 9-38260 bp Feature: gene Location: 38318-39082 bp Ori: OWQ16727.1 Feature: domain Description: FimC Location: 38363-39065 bp Feature: domain Description: FimC Location: 38363-39065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NIZK01000017.1 Klebsiella pneumoniae strain 852 NODE_90_length_1141_cov_301.632782, whole genome shotgun sequence (1237 bp)
Overview 1 RT 1: 1-1139 bp Neighborhood of RT #1 [1, 1139] RVT-GII Feature: gene Location: 1-888 bp Ori: OWQ28127.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-886 bp Feature: gene Location: 888-1139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIZK01000251.1 Klebsiella pneumoniae strain 852 NODE_420_length_4399_cov_18.311890, whole genome shotgun sequence (4495 bp)
Overview 1 RT 1: 1015-4493 bp Neighborhood of RT #1 [1015, 4493] COG3547 DDE_Tnp_1_5 RVT-GII GIIM Feature: gene Location: 1015-2040 bp Ori: OWQ18269.1 Feature: domain Description: COG3547 Location: 1030-1996 bp Feature: domain Description: COG3 547 Location: 103 0-1996 bp Feature: gene Location: 2380-3303 bp Ori: OWQ18270.1 Feature: domain Description: DDE_Tnp_1_5 Location: 2437-2770 bp Feature: domain Description: DDE_Tnp_1_5 Location: 243 7-2770 bp Feature: gene Location: 3371-4399 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3563-4187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 563 -4187 bp Feature: domain Description: GIIM Note: maturase Location: 4226-4400 bp Feature: domain Description: GIIM Note: maturase Location: 4226-4400 bp Feature: gene Location: 4401-4493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388)

Seq: NIZK01000048.1 Klebsiella pneumoniae strain 852 NODE_126_length_655_cov_282.566406, whole genome shotgun sequence (751 bp)
Overview 1 RT 1: 1-301 bp Neighborhood of RT #1 [1, 693] RVT-GII Feature: gene Location: 1-693 bp Ori: OWQ26386.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIZK01000149.1 Klebsiella pneumoniae strain 852 NODE_281_length_1041_cov_49.636887, whole genome shotgun sequence (1137 bp)
Overview 1 RT 1: 1-1137 bp Neighborhood of RT #1 [1, 1137] RVT-GII Feature: gene Location: 1-767 bp Ori: OWQ21949.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-763 bp Feature: gene Location: 900-1137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII