myRT

myRT report for GCA_002205295.1_ASM220529v1

Download annotations/find similar RTs

Seq: NIVU01000045.1 Stenotrophomonas maltophilia strain 7141307 7141307_NODE_50.ctg_1, whole genome shotgun sequence (34439 bp)
Overview 1 RT 1: 23494-31450 bp Neighborhood of RT #1 [23494, 31450] HATPase_c_3 RVT-UG16 guaA Feature: gene Location: 23494-24117 bp Feature: gene Location: 24949-26940 bp Ori: OWQ65387.1 Feature: domain Description: HATPase_c_3 Location: 25075-25405 bp Feature: domain Description: HATPase_c_3 Location: 25075-25405 bp Feature: gene Location: 27353-28840 bp Ori: OWQ65394.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 27716-28121 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 2771 6-281 21 bp Feature: gene Location: 29301-30866 bp Ori: OWQ65388.1 Feature: domain Description: guaA Location: 29316-30864 bp Feature: domain Description: guaA Location: 2931 6-30864 bp Feature: gene Location: 30863-31450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HATPase_c_3 (pfam13589), RVT-UG16, guaA (PRK00074)

Seq: NIVU01000105.1 Stenotrophomonas maltophilia strain 7141307 7141307_NODE_61.ctg_1, whole genome shotgun sequence (30075 bp)
Overview 1 RT 1: 20597-27385 bp Neighborhood of RT #1 [20597, 27385] COG3904 Autotransporter LDH_like_2 RVT-UG7 Feature: gene Location: 20597-23467 bp Ori: OWQ60356.1 Feature: domain Description: COG3904 Location: 20708-20951 bp Feature: domain Description: COG3904 Location: 2 0708-2 0951 bp Feature: domain Description: Autotransporter Location: 22634-23402 bp Feature: domain Description: Autotransporter Location: 2 2 634-2 3402 bp Feature: gene Location: 23565-24569 bp Ori: OWQ60357.1 Feature: domain Description: LDH_like_2 Location: 23568-24555 bp Feature: domain Description: LDH_like_2 Location: 2 3568-2 4555 bp Feature: gene Location: 25036-26658 bp Ori: OWQ60358.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 25465-25861 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 5465-2 5861 bp Feature: gene Location: 26679-27068 bp Feature: gene Location: 27071-27385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3904 (Predicted periplasmic protein ), Autotransporter (smart00869), LDH_like_2 (cd12183), RVT-UG7