myRT

myRT report for GCA_002206225.2_ASM220622v2

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Seq: NJFH02000002.1 Gardnerella vaginalis strain FDAARGOS_296 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence (1750745 bp)
Overview 1 RT 1: 1474720-1479446 bp Neighborhood of RT #1 [1474720, 1479484] Nudix_Hydrolase_29 COG1373 RVT-UG15 COG2865 ParE_toxin Feature: gene Location: 1474720-1475205 bp Ori: PNL26285.1 Feature: domain Description: Nudix_Hydrolase_29 Location: 1474765-1475146 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 1 474765-1 4751 46 bp Feature: gene Location: 1475209-1475463 bp Ori: PNL26286.1 Feature: domain Description: COG1373 Location: 1475236-1475455 bp Feature: domain Description: COG1 373 Location: 1 475236-1 475455 bp Feature: gene Location: 1475736-1477265 bp Ori: PNL26287.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1476189-1476588 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 4761 89-1 476588 bp Feature: gene Location: 1477275-1478690 bp Ori: PNL26288.1 Feature: domain Description: COG2865 Location: 1477278-1478685 bp Feature: domain Description: COG2865 Location: 1 477278-1 478685 bp Feature: gene Location: 1479161-1479484 bp Ori: PNL26289.1 Feature: domain Description: ParE_toxin Location: 1479179-1479446 bp Feature: domain Description: ParE_toxin Location: 1 4791 79-1 479446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_29 (cd04688), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG15, COG2865 (Predicted transcriptional regulator, contains HTH domain ), ParE_toxin (pfam05016)