myRT

myRT report for GCA_002206495.2_ASM220649v2

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Seq: NJFE02000002.1 Salmonella enterica strain FDAARGOS_318 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence (5022901 bp)
Overview 1 RT 1: 3396586-3402860 bp 2 RT 2: 4255480-4259648 bp Neighborhood of RT #1 [3396586, 3402865] Phage_int_SAM_2 Integrase_1 RVT-GII Tas PRK05790 Neighborhood of RT #2 [4255480, 4259656] RVT-Retrons PRK10473 Feature: gene Location: 3396586-3397485 bp Feature: domain Description: Phage_int_SAM_2 Location: 3396607-3396871 bp Feature: domain Description: Phage_int_SAM_2 Location: 3396607-3396871 bp Feature: domain Description: Integrase_1 Location: 3396910-3397351 bp Feature: domain Description: Integrase_1 Location: 339691 0-3397351 bp Feature: gene Location: 3398532-3399143 bp Feature: gene Location: 3399609-3400345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3399615-3399843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 339961 5-3399843 bp Feature: gene Location: 3400603-3401601 bp Feature: domain Description: Tas Location: 3400606-3401545 bp Feature: domain Description: Tas Location: 3400606-3401 545 bp Feature: gene Location: 3401690-3402865 bp Feature: domain Description: PRK05790 Location: 3401693-3402860 bp Feature: domain Description: PRK05790 Location: 3401 693-3402860 bp Feature: gene Location: 4255480-4255707 bp Feature: gene Location: 4255770-4256732 bp Feature: gene Location: 4256798-4257667 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4256843-4257428 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4256843-4257428 bp Feature: gene Location: 4257915-4258124 bp Feature: gene Location: 4258469-4259656 bp Feature: domain Description: PRK10473 Location: 4258472-4259648 bp Feature: domain Description: PRK1 0473 Location: 4258472-4259648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), RVT-GII, Tas (COG0667), PRK05790 (putative acyltransferase; Provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)