myRT

myRT report for GCA_002206845.1_ASM220684v1

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Seq: BDOY01000024.1 Escherichia coli DNA, contig: ERS055656.7114_1_9.24, whole genome shotgun sequence (76945 bp)
Overview 1 RT 1: 21862-25744 bp Neighborhood of RT #1 [21862, 25749] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 21862-22578 bp Feature: domain Description: rph Location: 21865-22573 bp Feature: domain Description: rph Location: 21 865-22573 bp Feature: gene Location: 22629-23285 bp Feature: domain Description: pyrE Location: 22647-23280 bp Feature: domain Description: pyrE Location: 22647-23280 bp Feature: gene Location: 23583-24542 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23718-24267 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2371 8-24267 bp Feature: gene Location: 24588-25184 bp Feature: domain Description: slmA Location: 24594-25170 bp Feature: domain Description: slmA Location: 24594-251 70 bp Feature: gene Location: 25291-25749 bp Feature: domain Description: dut Location: 25297-25744 bp Feature: domain Description: dut Location: 25297-25744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: BDOY01000037.1 Escherichia coli DNA, contig: ERS055656.7114_1_9.37, whole genome shotgun sequence (24546 bp)
Overview 1 RT 1: 5717-10008 bp Neighborhood of RT #1 [5717, 10008] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5717-6979 bp Feature: domain Description: YesM Location: 6230-6971 bp Feature: domain Description: YesM Location: 62 30-6971 bp Feature: gene Location: 7009-7179 bp Feature: gene Location: 7529-8050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7535-7817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7535-7817 bp Feature: domain Description: GIIM Note: maturase Location: 7865-8045 bp Feature: domain Description: GIIM Note: maturase Location: 7865-8045 bp Feature: gene Location: 8078-8617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8408-8486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8408-8486 bp Feature: gene Location: 8648-8845 bp Feature: gene Location: 9103-10008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: BDOY01000088.1 Escherichia coli DNA, contig: ERS055656.7114_1_9.88, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)