myRT

myRT report for GCA_002207145.1_ASM220714v1

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Seq: BDPO01000001.1 Escherichia coli DNA, contig: ERS077745.7521_4_74.1, whole genome shotgun sequence (526296 bp)
Overview 1 RT 1: 335442-339733 bp Neighborhood of RT #1 [335442, 339733] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 335442-336704 bp Feature: domain Description: YesM Location: 335955-336696 bp Feature: domain Description: YesM Location: 335955-336696 bp Feature: gene Location: 336734-336904 bp Feature: gene Location: 337254-337775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337260-337542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337260-337542 bp Feature: domain Description: GIIM Note: maturase Location: 337590-337770 bp Feature: domain Description: GIIM Note: maturase Location: 337590-337770 bp Feature: gene Location: 337803-338342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338133-338211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3381 33-33821 1 bp Feature: gene Location: 338373-338570 bp Feature: gene Location: 338828-339733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: BDPO01000019.1 Escherichia coli DNA, contig: ERS077745.7521_4_74.19, whole genome shotgun sequence (77019 bp)
Overview 1 RT 1: 51214-55096 bp Neighborhood of RT #1 [51214, 55101] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51214-51672 bp Feature: domain Description: dut Location: 51220-51667 bp Feature: domain Description: dut Location: 512 2 0-51667 bp Feature: gene Location: 51779-52375 bp Feature: domain Description: slmA Location: 51785-52361 bp Feature: domain Description: slmA Location: 51785-52 361 bp Feature: gene Location: 52421-53380 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52556-53105 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 556-53105 bp Feature: gene Location: 53678-54334 bp Feature: domain Description: pyrE Location: 53696-54329 bp Feature: domain Description: pyrE Location: 53696-5432 9 bp Feature: gene Location: 54385-55101 bp Feature: domain Description: rph Location: 54388-55096 bp Feature: domain Description: rph Location: 54388-55096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: BDPO01000045.1 Escherichia coli DNA, contig: ERS077745.7521_4_74.45, whole genome shotgun sequence (2470 bp)
Overview 1 RT 1: 116-2402 bp Neighborhood of RT #1 [116, 2467] RVT-GII GIIM PHA02517 Feature: gene Location: 116-1639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 89-1121 bp Feature: domain Description: GIIM Note: maturase Location: 1196-1394 bp Feature: domain Description: GIIM Note: maturase Location: 1196-13 94 bp Feature: gene Location: 2231-2467 bp Feature: domain Description: PHA02517 Location: 2234-2402 bp Feature: domain Description: PHA02517 Location: 223 4-2402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)