myRT

myRT report for GCA_002207405.1_ASM220740v1

Download annotations/find similar RTs

Seq: BDRB01000015.1 Escherichia coli DNA, contig: ERS077607.7521_1_32.15, whole genome shotgun sequence (108312 bp)
Overview 1 RT 1: 99584-103512 bp Neighborhood of RT #1 [99584, 103517] TIGR02646 COG3950 RVT-Retrons DinI Feature: gene Location: 99584-100252 bp Feature: domain Description: TIGR02646 Location: 99650-100046 bp Feature: domain Description: TIGR02646 Location: 99650-1 00046 bp Feature: gene Location: 100265-101878 bp Feature: domain Description: COG3950 Location: 100409-101840 bp Feature: domain Description: COG3950 Location: 1 00409-1 01 840 bp Feature: gene Location: 101871-102854 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102018-102612 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0201 8-1 0261 2 bp Feature: gene Location: 103048-103197 bp Feature: gene Location: 103284-103517 bp Feature: domain Description: DinI Location: 103326-103512 bp Feature: domain Description: DinI Location: 1 03326-1 0351 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, DinI (pfam06183)

Seq: BDRB01000030.1 Escherichia coli DNA, contig: ERS077607.7521_1_32.30, whole genome shotgun sequence (50339 bp)
Overview 1 RT 1: 45009-50214 bp Neighborhood of RT #1 [45009, 50336] prfC SLATT_5 RVT-UG17 Caudo_TAP Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 45009-46595 bp Feature: domain Description: prfC Location: 45027-46593 bp Feature: domain Description: prfC Location: 4502 7-46593 bp Feature: gene Location: 47126-47830 bp Feature: domain Description: SLATT_5 Location: 47288-47798 bp Feature: domain Description: SLATT_5 Location: 472 88-47798 bp Feature: gene Location: 47808-49178 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 48036-48642 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 48036-48642 bp Feature: gene Location: 49291-49875 bp Feature: domain Description: Caudo_TAP Location: 49507-49864 bp Feature: domain Description: Caudo_TAP Location: 49507-49864 bp Feature: gene Location: 49875-50336 bp Feature: domain Description: Phage_fiber Location: 49929-49968 bp Feature: domain Description: Phage_fiber Location: 4992 9-49968 bp Feature: domain Description: Phage_fiber Location: 49974-49995 bp Feature: domain Description: Phage_fiber Location: 49974-49995 bp Feature: domain Description: Phage_fiber Location: 50142-50178 bp Feature: domain Description: Phage_fiber Location: 50142 -50178 bp Feature: domain Description: Phage_fiber Location: 50184-50214 bp Feature: domain Description: Phage_fiber Location: 50184-502 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Phage_fiber (pfam03335)