myRT

myRT report for GCA_002207445.1_ASM220744v1

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Seq: BDRD01000015.1 Escherichia coli DNA, contig: ERS077608.7521_1_33.15, whole genome shotgun sequence (109482 bp)
Overview 1 RT 1: 6566-10293 bp Neighborhood of RT #1 [6566, 10499] DinI RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 6566-6799 bp Feature: domain Description: DinI Location: 6608-6794 bp Feature: domain Description: DinI Location: 6608-6794 bp Feature: gene Location: 6886-7035 bp Feature: gene Location: 7229-8212 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7376-7970 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7376-7970 bp Feature: gene Location: 8205-9818 bp Feature: domain Description: COG3950 Location: 8349-9780 bp Feature: domain Description: COG3950 Location: 8349-9780 bp Feature: gene Location: 9831-10499 bp Feature: domain Description: TIGR02646 Location: 9897-10293 bp Feature: domain Description: TIGR02646 Location: 9897-1 0293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: BDRD01000075.1 Escherichia coli DNA, contig: ERS077608.7521_1_33.75, whole genome shotgun sequence (8711 bp)
Overview 1 RT 1: 3391-8587 bp Neighborhood of RT #1 [3391, 8709] prfC SLATT_5 RVT-UG17 Caudo_TAP Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 3391-4977 bp Feature: domain Description: prfC Location: 3409-4975 bp Feature: domain Description: prfC Location: 3409-4975 bp Feature: gene Location: 5508-6212 bp Feature: domain Description: SLATT_5 Location: 5670-6180 bp Feature: domain Description: SLATT_5 Location: 5670-6180 bp Feature: gene Location: 6190-7560 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6418-7024 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6418-702 4 bp Feature: gene Location: 7673-8257 bp Feature: domain Description: Caudo_TAP Location: 7889-8246 bp Feature: domain Description: Caudo_TAP Location: 7889-82 46 bp Feature: gene Location: 8257-8709 bp Feature: domain Description: Phage_fiber Location: 8302-8341 bp Feature: domain Description: Phage_fiber Location: 8302 -8341 bp Feature: domain Description: Phage_fiber Location: 8347-8368 bp Feature: domain Description: Phage_fiber Location: 8347-8368 bp Feature: domain Description: Phage_fiber Location: 8515-8551 bp Feature: domain Description: Phage_fiber Location: 8515-8551 bp Feature: domain Description: Phage_fiber Location: 8557-8587 bp Feature: domain Description: Phage_fiber Location: 8557-8587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Phage_fiber (pfam03335)