myRT

myRT report for GCA_002207465.1_ASM220746v1

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Seq: BDRE01000038.1 Escherichia coli DNA, contig: ERS077609.7521_1_34.38, whole genome shotgun sequence (30767 bp)
Overview 1 RT 1: 3617-7977 bp Neighborhood of RT #1 [3617, 7979] D PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 3617-4717 bp Feature: domain Description: D Location: 3623-4706 bp Feature: domain Description: D Location: 3623-4706 bp Feature: gene Location: 4808-5026 bp Feature: domain Description: PRK09678 Location: 4811-5009 bp Feature: domain Description: PRK09678 Location: 481 1 -5009 bp Feature: gene Location: 5430-6203 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 5565-6018 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 5565-601 8 bp Feature: gene Location: 6889-7371 bp Feature: domain Description: SmpB Location: 6919-7366 bp Feature: domain Description: SmpB Location: 691 9-7366 bp Feature: gene Location: 7503-7979 bp Feature: domain Description: PRK10724 Location: 7509-7977 bp Feature: domain Description: PRK1 0724 Location: 7509-7977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: BDRE01000087.1 Escherichia coli DNA, contig: ERS077609.7521_1_34.87, whole genome shotgun sequence (3107 bp)
Overview 1 RT 1: 3-3041 bp Neighborhood of RT #1 [3, 3106] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 3-329 bp Feature: domain Description: PHA02517 Location: 6-330 bp Feature: domain Description: PHA02 517 Location: 6-330 bp Feature: gene Location: 446-1969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 719-1451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 719-1451 bp Feature: domain Description: GIIM Note: maturase Location: 1526-1724 bp Feature: domain Description: GIIM Note: maturase Location: 152 6-172 4 bp Feature: gene Location: 2561-3106 bp Feature: domain Description: PHA02517 Location: 2687-3041 bp Feature: domain Description: PHA02 517 Location: 2 687-3041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)