myRT

myRT report for GCA_002207485.1_ASM220748v1

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Seq: BDRF01000001.1 Escherichia coli DNA, contig: ERS077728.7521_4_57.1, whole genome shotgun sequence (758081 bp)
Overview 1 RT 1: 325461-329752 bp Neighborhood of RT #1 [325461, 329752] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 325461-326723 bp Feature: domain Description: YesM Location: 325974-326715 bp Feature: domain Description: YesM Location: 325974-32671 5 bp Feature: gene Location: 326753-326923 bp Feature: gene Location: 327273-327794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327279-327561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327279-327561 bp Feature: domain Description: GIIM Note: maturase Location: 327609-327789 bp Feature: domain Description: GIIM Note: maturase Location: 327609-327789 bp Feature: gene Location: 327822-328361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328152-328230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3281 52-328230 bp Feature: gene Location: 328392-328589 bp Feature: gene Location: 328847-329752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: BDRF01000018.1 Escherichia coli DNA, contig: ERS077728.7521_4_57.18, whole genome shotgun sequence (77427 bp)
Overview 1 RT 1: 51637-55519 bp Neighborhood of RT #1 [51637, 55524] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51637-52095 bp Feature: domain Description: dut Location: 51643-52090 bp Feature: domain Description: dut Location: 51643-52 090 bp Feature: gene Location: 52202-52798 bp Feature: domain Description: slmA Location: 52208-52784 bp Feature: domain Description: slmA Location: 52 2 08-52 784 bp Feature: gene Location: 52844-53803 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52979-53528 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 979-5352 8 bp Feature: gene Location: 54101-54757 bp Feature: domain Description: pyrE Location: 54119-54752 bp Feature: domain Description: pyrE Location: 54119-54752 bp Feature: gene Location: 54808-55524 bp Feature: domain Description: rph Location: 54811-55519 bp Feature: domain Description: rph Location: 54811-55519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: BDRF01000053.1 Escherichia coli DNA, contig: ERS077728.7521_4_57.53, whole genome shotgun sequence (1609 bp)
Overview 1 RT 1: 3-1565 bp Neighborhood of RT #1 [3, 1567] RVT-GII GIIM PHA02517 Feature: gene Location: 3-1004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-486 bp Feature: domain Description: GIIM Note: maturase Location: 561-759 bp Feature: domain Description: GIIM Note: maturase Location: 561-759 bp Feature: gene Location: 1181-1567 bp Feature: domain Description: PHA02517 Location: 1184-1565 bp Feature: domain Description: PHA02517 Location: 1184-1565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: BDRF01000084.1 Escherichia coli DNA, contig: ERS077728.7521_4_57.84, whole genome shotgun sequence (680 bp)
Overview 1 RT 1: 2-590 bp Neighborhood of RT #1 [2, 652] RVT-GII Feature: gene Location: 2-652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230-590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BDRF01000092.1 Escherichia coli DNA, contig: ERS077728.7521_4_57.92, whole genome shotgun sequence (578 bp)
Overview 1 RT 1: 98-563 bp Neighborhood of RT #1 [98, 577] RVT-GII Feature: gene Location: 98-577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326-563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326-5 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII