myRT

myRT report for GCA_002207665.1_ASM220766v1

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Seq: BDRO01000040.1 Escherichia coli DNA, contig: ERS077630.7521_2_55.40, whole genome shotgun sequence (35547 bp)
Overview 1 RT 1: 21349-25337 bp Neighborhood of RT #1 [21349, 25438] psiB RVT_N RVT-GII GIIM HNHc AdoMet_MTases Feature: gene Location: 21349-21783 bp Feature: domain Description: psiB Location: 21352-21778 bp Feature: domain Description: psiB Location: 21 352-21 778 bp Feature: gene Location: 21838-22587 bp Feature: gene Location: 22872-24539 bp Feature: RT Description: RVT_N Location: 22920-23157 bp Feature: RT Description: RVT_N Location: 22920-231 57 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23208-23850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23208-23850 bp Feature: domain Description: GIIM Note: maturase Location: 23901-24135 bp Feature: domain Description: GIIM Note: maturase Location: 23901 -241 35 bp Feature: domain Description: HNHc Note: nucleases Location: 24345-24504 bp Feature: domain Description: HNHc Note: nucleases Location: 24345-24504 bp Feature: gene Location: 24517-24789 bp Feature: gene Location: 24875-25438 bp Feature: domain Description: AdoMet_MTases Location: 25037-25337 bp Feature: domain Description: AdoMet_MTases Location: 25037-25337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT psiB (PRK13701), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), AdoMet_MTases (cl17173)

Seq: BDRO01000051.1 Escherichia coli DNA, contig: ERS077630.7521_2_55.51, whole genome shotgun sequence (14796 bp)
Overview 1 RT 1: 7839-11566 bp Neighborhood of RT #1 [7839, 11772] DinI RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 7839-8072 bp Feature: domain Description: DinI Location: 7881-8067 bp Feature: domain Description: DinI Location: 7881-8067 bp Feature: gene Location: 8159-8308 bp Feature: gene Location: 8502-9485 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8649-9243 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8649-92 43 bp Feature: gene Location: 9478-11091 bp Feature: domain Description: COG3950 Location: 9622-11056 bp Feature: domain Description: COG3950 Location: 962 2 -11056 bp Feature: gene Location: 11104-11772 bp Feature: domain Description: TIGR02646 Location: 11170-11566 bp Feature: domain Description: TIGR02 646 Location: 11170-11566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), DinI (pfam06183), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )