myRT

myRT report for GCA_002207685.1_ASM220768v1

Download annotations/find similar RTs

Seq: BDRP01000032.1 Escherichia coli DNA, contig: ERS077614.7521_1_39.32, whole genome shotgun sequence (50344 bp)
Overview 1 RT 1: 45011-50219 bp Neighborhood of RT #1 [45011, 50341] prfC SLATT_5 RVT-UG17 Caudo_TAP Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 45011-46597 bp Feature: domain Description: prfC Location: 45029-46595 bp Feature: domain Description: prfC Location: 45029-46595 bp Feature: gene Location: 47128-47832 bp Feature: domain Description: SLATT_5 Location: 47290-47800 bp Feature: domain Description: SLATT_5 Location: 47290-47800 bp Feature: gene Location: 47810-49180 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 48038-48644 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 48038-48644 bp Feature: gene Location: 49293-49877 bp Feature: domain Description: Caudo_TAP Location: 49509-49866 bp Feature: domain Description: Caudo_TAP Location: 49509-49866 bp Feature: gene Location: 49877-50341 bp Feature: domain Description: Phage_fiber Location: 49934-49973 bp Feature: domain Description: Phage_fiber Location: 49934-49973 bp Feature: domain Description: Phage_fiber Location: 49979-50000 bp Feature: domain Description: Phage_fiber Location: 49979-50000 bp Feature: domain Description: Phage_fiber Location: 50147-50183 bp Feature: domain Description: Phage_fiber Location: 501 47-501 83 bp Feature: domain Description: Phage_fiber Location: 50189-50219 bp Feature: domain Description: Phage_fiber Location: 501 89-5021 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Phage_fiber (pfam03335)

Seq: BDRP01000041.1 Escherichia coli DNA, contig: ERS077614.7521_1_39.41, whole genome shotgun sequence (40610 bp)
Overview 1 RT 1: 30089-34017 bp Neighborhood of RT #1 [30089, 34022] TIGR02646 COG3950 RVT-Retrons DinI Feature: gene Location: 30089-30757 bp Feature: domain Description: TIGR02646 Location: 30155-30551 bp Feature: domain Description: TIGR02 646 Location: 30155-30551 bp Feature: gene Location: 30770-32383 bp Feature: domain Description: COG3950 Location: 30914-32345 bp Feature: domain Description: COG3950 Location: 30914-32 345 bp Feature: gene Location: 32376-33359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32523-33117 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 52 3-33117 bp Feature: gene Location: 33553-33702 bp Feature: gene Location: 33789-34022 bp Feature: domain Description: DinI Location: 33831-34017 bp Feature: domain Description: DinI Location: 33831-34017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, DinI (pfam06183)