myRT

myRT report for GCA_002207865.1_ASM220786v1

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Seq: BDQM01000017.1 Colwellia marinimaniae DNA, contig: sequence017, strain: MTCD1, whole genome shotgun sequence (77805 bp)
Overview 1 RT 1: 69628-73352 bp Neighborhood of RT #1 [69628, 73352] INT_ICEBs1_C_like RVT-UG11 Feature: gene Location: 69628-69945 bp Feature: gene Location: 70004-71290 bp Ori: GAW96686.1 Feature: domain Description: INT_ICEBs1_C_like Location: 70616-71120 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 7061 6-71 1 20 bp Feature: gene Location: 71639-72040 bp Ori: GAW96687.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 71657-71843 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 71 657-71 843 bp Feature: gene Location: 72322-72921 bp Feature: gene Location: 73080-73352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-UG11

Seq: BDQM01000001.1 Colwellia marinimaniae DNA, contig: sequence001, strain: MTCD1, whole genome shotgun sequence (382887 bp)
Overview 1 RT 1: 96532-104025 bp Neighborhood of RT #1 [96532, 104030] CarboxypepD_reg ligand_gated_channel TonB-hemlactrns RVT-GII RVT-GII GIIM PBP1_ABC_sugar_binding_like_13 CvfB Feature: gene Location: 96532-96855 bp Feature: gene Location: 96984-99479 bp Ori: GAW94488.1 Feature: domain Description: CarboxypepD_reg Location: 97116-97341 bp Feature: domain Description: CarboxypepD_reg Location: 97116-97341 bp Feature: domain Description: ligand_gated_channel Location: 97416-98346 bp Feature: domain Description: ligand_gated_channel Location: 97416-98346 bp Feature: domain Description: TonB-hemlactrns Location: 98346-99468 bp Feature: domain Description: TonB-hemlactrns Location: 98346-99468 bp Feature: gene Location: 100553-101197 bp Ori: GAW94489.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100766-101195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100766-101195 bp Feature: gene Location: 101198-101818 bp Ori: GAW94490.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101201-101381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012 01-101381 bp Feature: domain Description: GIIM Note: maturase Location: 101432-101654 bp Feature: domain Description: GIIM Note: maturase Location: 101432 -101654 bp Feature: gene Location: 101995-103125 bp Ori: GAW94491.1 Feature: domain Description: PBP1_ABC_sugar_binding_like_13 Location: 102097-102982 bp Feature: domain Description: PBP1_ABC_sugar_binding_like_13 Location: 102 097-102 982 bp Feature: gene Location: 103176-104030 bp Ori: GAW94492.1 Gene: yitL Feature: domain Description: CvfB Location: 103206-104025 bp Feature: domain Description: CvfB Location: 1032 06-10402 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CarboxypepD_reg (pfam13620), ligand_gated_channel (cd01347), TonB-hemlactrns (TIGR01786), RVT-GII, GIIM (pfam08388), PBP1_ABC_sugar_binding_like_13, CvfB (COG2996)

Seq: BDQM01000034.1 Colwellia marinimaniae DNA, contig: sequence034, strain: MTCD1, whole genome shotgun sequence (40458 bp)
Overview 1 RT 1: 113-3775 bp Neighborhood of RT #1 [113, 3775] RVT-GII GIIM Feature: gene Location: 113-370 bp Feature: gene Location: 1148-2485 bp Ori: GAW97434.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1421-2039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1421-203 9 bp Feature: domain Description: GIIM Note: maturase Location: 2087-2291 bp Feature: domain Description: GIIM Note: maturase Location: 2087-2291 bp Feature: gene Location: 2612-3271 bp Feature: gene Location: 3377-3775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)