myRT

myRT report for GCA_002207985.2_ASM220798v2

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Seq: NBSF01000114.1 Escherichia coli strain Ec39590 Ctg_115_5049_cov_22.743315, whole genome shotgun sequence (5127 bp)
Overview 1 RT 1: 236-2779 bp Neighborhood of RT #1 [236, 2805] RVT-GII DcuC Feature: gene Location: 236-798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542-644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542-644 bp Feature: gene Location: 1164-1391 bp Feature: gene Location: 1444-2805 bp Ori: OWS82797.1 Feature: domain Description: DcuC Location: 1447-2779 bp Feature: domain Description: DcuC Location: 1 447-2779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DcuC (TIGR00771)

Seq: NBSF01000110.1 Escherichia coli strain Ec39590 Ctg_185_5296_cov_27.602152, whole genome shotgun sequence (5374 bp)
Overview 1 RT 1: 1-2890 bp Neighborhood of RT #1 [1, 2910] RVT-UG3 PRK09678 Psu Feature: gene Location: 1-418 bp Feature: gene Location: 409-1686 bp Ori: OWS82818.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 697-1192 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 697-1192 bp Feature: gene Location: 2081-2353 bp Ori: OWS82819.1 Feature: domain Description: PRK09678 Location: 2090-2255 bp Feature: domain Description: PRK09678 Location: 2 090-2 2 55 bp Feature: gene Location: 2359-2910 bp Ori: OWS82820.1 Feature: domain Description: Psu Location: 2380-2890 bp Feature: domain Description: Psu Location: 2 380-2 890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)

Seq: NBSF01000131.1 Escherichia coli strain Ec39590 Ctg_77_3374_cov_23.387077, whole genome shotgun sequence (3452 bp)
Overview 1 RT 1: 769-3453 bp Neighborhood of RT #1 [769, 3452] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 769-1167 bp Feature: gene Location: 1305-1364 bp Feature: gene Location: 1656-2690 bp Ori: OWS82724.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082-2673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082-2673 bp Feature: gene Location: 2826-3106 bp Feature: domain Description: GIIM Note: maturase Location: 2832-2946 bp Feature: domain Description: GIIM Note: maturase Location: 283 2-2946 bp Feature: gene Location: 3330-3452 bp Ori: OWS82725.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 3333-3453 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3 3 3 3 -3 453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)

Seq: NBSF01000218.1 Escherichia coli strain Ec39590 Ctg_509_509_cov_14.212181, whole genome shotgun sequence (587 bp)
Overview 1 RT 1: 1-580 bp Neighborhood of RT #1 [1, 587] RVT-UG8 Feature: gene Location: 1-587 bp Ori: OWS82576.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 211-580 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 211-580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8