myRT

myRT report for GCA_002213445.1_ASM221344v1

Download annotations/find similar RTs

Seq: NJIE01000028.1 Xenophilus sp. AP218F NODE_15_length_103770_cov_161.489, whole genome shotgun sequence (103770 bp)
Overview 1 RT 1: 1636-8742 bp Neighborhood of RT #1 [1636, 8742] Mrr_cat CSD RVT-Retrons PRK07078 DUF927 Feature: gene Location: 1636-2832 bp Ori: OWY37651.1 Feature: domain Description: Mrr_cat Location: 2080-2428 bp Feature: domain Description: Mrr_cat Location: 2080-2428 bp Feature: gene Location: 2968-3180 bp Ori: OWY37652.1 Feature: domain Description: CSD Location: 2980-3169 bp Feature: domain Description: CSD Location: 2980-31 69 bp Feature: gene Location: 3170-4348 bp Ori: OWY37653.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3299-3875 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3299-3875 bp Feature: gene Location: 5531-8416 bp Ori: OWY37654.1 Feature: domain Description: PRK07078 Location: 5558-6524 bp Feature: domain Description: PRK07078 Location: 5558-6524 bp Feature: domain Description: DUF927 Location: 6665-7484 bp Feature: domain Description: DUF927 Location: 6665-7484 bp Feature: gene Location: 8419-8742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), CSD (pfam00313), RVT-Retrons, PRK07078 (hypothetical protein; Validated), DUF927 (pfam06048)

Seq: NJIE01000018.1 Xenophilus sp. AP218F Contig_19, whole genome shotgun sequence (87738 bp)
Overview 1 RT 1: 48859-53354 bp Neighborhood of RT #1 [48859, 53354] Endonuclea_NS_2 RVT-UG4 RAYT Feature: gene Location: 48859-49557 bp Ori: OWY38926.1 Feature: domain Description: Endonuclea_NS_2 Location: 49204-49378 bp Feature: domain Description: Endonuclea_NS_2 Location: 492 04-49378 bp Feature: gene Location: 49713-50504 bp Feature: gene Location: 50732-51679 bp Ori: OWY38928.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 51113-51560 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 51113-51560 bp Feature: gene Location: 51921-52145 bp Ori: OWY38929.1 Feature: domain Description: RAYT Location: 51933-52116 bp Feature: domain Description: RAYT Location: 51933-52 116 bp Feature: gene Location: 53124-53354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endonuclea_NS_2 (pfam13930), RVT-UG4, RAYT (COG1943)