myRT

myRT report for GCA_002214185.1_ASM221418v1

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Seq: CP022161.1 Streptomyces sp. 1H-SSA4 genome (10989391 bp)
Overview 1 RT 1: 1493074-1496787 bp 2 RT 2: 2763603-2769778 bp 3 RT 3: 6169064-6178375 bp 4 RT 4: 6892945-6896976 bp 5 RT 5: 10912098-10920489 bp Neighborhood of RT #1 [1493074, 1497038] COG3293 COG3293 RVT-GII GIIM pbp2_mrdA pbp2_mrdA Neighborhood of RT #2 [2763603, 2769778] OmpR BaeS RVT-GII GIIM DDE_5 Neighborhood of RT #3 [6169064, 6178386] Pentapeptide_3 Pentapeptide_3 Pentapeptide_3 Pentapeptide_3 Pentapeptide_3 RVT_N RVT-GII GIIM HNH TetR_C_33 YjgF_YER057c_UK114_family Neighborhood of RT #4 [6892945, 6896976] OPHC2-like_MBL-fold Tas RVT-GII GIIM COG3464 Neighborhood of RT #5 [10912098, 10920497] Peptidases_S8_Tripeptidyl_Aminopeptidase_II MetH2 RVT-GII PRK12467 PRK09685 Feature: gene Location: 1493074-1493709 bp Feature: domain Description: COG3293 Location: 1493080-1493311 bp Feature: domain Description: COG3293 Location: 1 493080-1 49331 1 bp Feature: domain Description: COG3293 Location: 1493356-1493611 bp Feature: domain Description: COG3293 Location: 1 493356-1 49361 1 bp Feature: gene Location: 1494488-1494820 bp Feature: gene Location: 1494864-1495271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1494879-1495248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 494879-1 495248 bp Feature: gene Location: 1495319-1495633 bp Feature: domain Description: GIIM Note: maturase Location: 1495328-1495544 bp Feature: domain Description: GIIM Note: maturase Location: 1 495328-1 495544 bp Feature: gene Location: 1495851-1497038 bp Feature: domain Description: pbp2_mrdA Location: 1496166-1496643 bp Feature: domain Description: pbp2_mrdA Location: 1 4961 66-1 496643 bp Feature: domain Description: pbp2_mrdA Location: 1496703-1496787 bp Feature: domain Description: pbp2_mrdA Location: 1 496703-1 496787 bp Feature: gene Location: 2763603-2764289 bp Feature: domain Description: OmpR Location: 2763606-2764266 bp Feature: domain Description: OmpR Location: 2763606-2764266 bp Feature: gene Location: 2764337-2765656 bp Feature: domain Description: BaeS Location: 2764745-2765648 bp Feature: domain Description: BaeS Location: 2764745-2765648 bp Feature: gene Location: 2765757-2766902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2765877-2766516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2765877-276651 6 bp Feature: domain Description: GIIM Note: maturase Location: 2766600-2766819 bp Feature: domain Description: GIIM Note: maturase Location: 2766600-276681 9 bp Feature: gene Location: 2768323-2769234 bp Feature: domain Description: DDE_5 Location: 2768329-2768653 bp Feature: domain Description: DDE_5 Location: 2768329-2768653 bp Feature: gene Location: 2769590-2769778 bp Feature: gene Location: 6169064-6171805 bp Feature: gene Location: 6172723-6174435 bp Feature: domain Description: Pentapeptide_3 Location: 6173068-6173206 bp Feature: domain Description: Pentapeptide_3 Location: 61 73068-61 73206 bp Feature: domain Description: Pentapeptide_3 Location: 6173323-6173431 bp Feature: domain Description: Pentapeptide_3 Location: 61 73323-61 73431 bp Feature: domain Description: Pentapeptide_3 Location: 6173461-6173590 bp Feature: domain Description: Pentapeptide_3 Location: 61 73461 -61 73590 bp Feature: domain Description: Pentapeptide_3 Location: 6173662-6173782 bp Feature: domain Description: Pentapeptide_3 Location: 61 73662-61 73782 bp Feature: domain Description: Pentapeptide_3 Location: 6174100-6174145 bp Feature: domain Description: Pentapeptide_3 Location: 61 741 00-61 741 45 bp Feature: gene Location: 6175121-6176866 bp Feature: domain Description: RVT_N Location: 6175154-6175400 bp Feature: domain Description: RVT_N Location: 61 751 54-61 75400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6175448-6176099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 75448-61 76099 bp Feature: domain Description: GIIM Note: maturase Location: 6176150-6176384 bp Feature: domain Description: GIIM Note: maturase Location: 61 761 50-61 76384 bp Feature: domain Description: HNH Note: nucleases Location: 6176711-6176810 bp Feature: domain Description: HNH Note: nucleases Location: 61 7671 1 -61 7681 0 bp Feature: gene Location: 6177248-6177787 bp Feature: domain Description: TetR_C_33 Location: 6177383-6177638 bp Feature: domain Description: TetR_C_33 Location: 61 77383-61 77638 bp Feature: gene Location: 6177979-6178386 bp Feature: domain Description: YjgF_YER057c_UK114_family Location: 6178051-6178375 bp Feature: domain Description: YjgF_YER057c_UK1 1 4_family Location: 61 78051 -61 78375 bp Feature: gene Location: 6892945-6893772 bp Feature: domain Description: OPHC2-like_MBL-fold Location: 6892975-6893680 bp Feature: domain Description: OPHC2-like_MBL-fold Location: 6892975-6893680 bp Feature: gene Location: 6893831-6894775 bp Feature: domain Description: Tas Location: 6893837-6894746 bp Feature: domain Description: Tas Location: 6893837-6894746 bp Feature: gene Location: 6895348-6896283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6895378-6895843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6895378-6895843 bp Feature: domain Description: GIIM Note: maturase Location: 6895927-6896146 bp Feature: domain Description: GIIM Note: maturase Location: 6895927-68961 46 bp Feature: gene Location: 6896636-6896791 bp Feature: domain Description: COG3464 Location: 6896648-6896762 bp Feature: domain Description: COG3464 Location: 6896648-6896762 bp Feature: gene Location: 6896788-6896976 bp Feature: gene Location: 10912098-10912943 bp Feature: domain Description: Peptidases_S8_Tripeptidyl_Aminopeptidase_II Location: 10912641-10912800 bp Feature: domain Description: Peptidases_S8_Tripeptidyl_Aminopeptidase_II Location: 1 091 2641 -1 091 2800 bp Feature: gene Location: 10913776-10915554 bp Feature: domain Description: MetH2 Location: 10913779-10915450 bp Feature: domain Description: MetH2 Location: 1 091 3779-1 091 5450 bp Feature: gene Location: 10915988-10917301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10916249-10917044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 091 6249-1 091 7044 bp Feature: gene Location: 10917246-10919144 bp Feature: domain Description: PRK12467 Location: 10917252-10918923 bp Feature: domain Description: PRK1 2467 Location: 1 091 7252-1 091 8923 bp Feature: gene Location: 10919541-10920497 bp Feature: domain Description: PRK09685 Location: 10919649-10920489 bp Feature: domain Description: PRK09685 Location: 1 091 9649-1 0920489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3293 (Transposase ), RVT-GII, GIIM (pfam08388), pbp2_mrdA (TIGR03423), OmpR (COG0745), BaeS (COG0642), DDE_5 (pfam13546), Pentapeptide_3 (pfam13576), RVT_N (pfam13655), HNH (pfam01844)
TetR_C_33, YjgF_YER057c_UK114_family (cl10015), OPHC2-like_MBL-fold (cd07720), Tas (COG0667), COG3464 (Transposase ), Peptidases_S8_Tripeptidyl_Aminopeptidase_II (cd04857), MetH2 (COG1410), PRK12467 (peptide synthase; Provisional), PRK09685 (DNA-binding transcriptional activator FeaR; Provisional)