myRT

myRT report for GCA_002216005.1_ASM221600v1

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Seq: NIQC01000107.1 Natranaerobius trueperi strain DSM 18760 ZB100107, whole genome shotgun sequence (329 bp)
Overview 1 RT 1: 1-322 bp Neighborhood of RT #1 [1, 329] RVT-GII Feature: gene Location: 1-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202-322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202-322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQC01000125.1 Natranaerobius trueperi strain DSM 18760 ZB100125, whole genome shotgun sequence (247 bp)
Overview 1 RT 1: 9-246 bp Neighborhood of RT #1 [9, 247] RVT-GII Feature: gene Location: 9-247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 -2 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQC01000071.1 Natranaerobius trueperi strain DSM 18760 ZB100070, whole genome shotgun sequence (835 bp)
Overview 1 RT 1: 325-835 bp Neighborhood of RT #1 [325, 835] group_II_RT_mat RVT-GII Feature: gene Location: 325-835 bp Ori: OWZ82633.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 433-634 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 43 3 -63 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 637-835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 7-83 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: NIQC01000052.1 Natranaerobius trueperi strain DSM 18760 ZB100051, whole genome shotgun sequence (5947 bp)
Overview 1 RT 1: 21-2540 bp Neighborhood of RT #1 [21, 2548] RVT-GII GIIM PCMT PsuG Feature: gene Location: 21-245 bp Feature: gene Location: 439-651 bp Feature: gene Location: 787-2136 bp Ori: OWZ82677.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1060-1678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1060-1678 bp Feature: domain Description: GIIM Note: maturase Location: 1729-1960 bp Feature: domain Description: GIIM Note: maturase Location: 1729-1960 bp Feature: gene Location: 2206-2388 bp Ori: OWZ82671.1 Feature: domain Description: PCMT Location: 2209-2383 bp Feature: domain Description: PCMT Location: 2209-2383 bp Feature: gene Location: 2402-2548 bp Ori: OWZ82672.1 Feature: domain Description: PsuG Location: 2405-2540 bp Feature: domain Description: PsuG Location: 24 05-254 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PCMT (pfam01135), PsuG (COG2313)

Seq: NIQC01000046.1 Natranaerobius trueperi strain DSM 18760 ZB100045, whole genome shotgun sequence (10102 bp)
Overview 1 RT 1: 1-3313 bp Neighborhood of RT #1 [1, 3313] RVT-GII RES Feature: gene Location: 1-398 bp Ori: OWZ82732.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325-397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325 -397 bp Feature: gene Location: 1290-2387 bp Ori: OWZ82725.1 Feature: domain Description: RES Location: 1893-2310 bp Feature: domain Description: RES Location: 1893-2310 bp Feature: gene Location: 2384-3313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RES (smart00953)

Seq: NIQC01000127.1 Natranaerobius trueperi strain DSM 18760 ZB100127, whole genome shotgun sequence (226 bp)
Overview 1 RT 1: 1-106 bp Neighborhood of RT #1 [1, 217] RVT-GII Feature: gene Location: 1-217 bp Ori: OWZ82596.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQC01000053.1 Natranaerobius trueperi strain DSM 18760 ZB100052, whole genome shotgun sequence (5927 bp)
Overview 1 RT 1: 1787-5460 bp Neighborhood of RT #1 [1787, 5460] PRK09355 TenA RVT-GII DDE_Tnp_IS240 Feature: gene Location: 1787-2608 bp Ori: OWZ82666.1 Feature: domain Description: PRK09355 Location: 1823-2600 bp Feature: domain Description: PRK09355 Location: 1823-2600 bp Feature: gene Location: 2760-3428 bp Ori: OWZ82667.1 Gene: tenA Feature: domain Description: TenA Location: 2763-3405 bp Feature: domain Description: TenA Location: 27 63-3405 bp Feature: gene Location: 3537-4074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3627-3897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3627 -3897 bp Feature: gene Location: 4371-4694 bp Feature: domain Description: DDE_Tnp_IS240 Location: 4377-4596 bp Feature: domain Description: DDE_Tnp_IS240 Location: 437 7 -4596 bp Feature: gene Location: 4852-5460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09355 (hydroxyethylthiazole kinase; Validated), TenA (COG0819), RVT-GII, DDE_Tnp_IS240 (pfam13610)

Seq: NIQC01000044.1 Natranaerobius trueperi strain DSM 18760 ZB100043, whole genome shotgun sequence (12546 bp)
Overview 1 RT 1: 6074-11156 bp Neighborhood of RT #1 [6074, 11156] DUF45 COG2509 RVT-GII Feature: gene Location: 6074-6775 bp Ori: OWZ82748.1 Feature: domain Description: DUF45 Location: 6134-6749 bp Feature: domain Description: DUF45 Location: 6134-6749 bp Feature: gene Location: 7167-8600 bp Ori: OWZ82749.1 Feature: domain Description: COG2509 Location: 7176-8589 bp Feature: domain Description: COG2509 Location: 7176-8 58 9 bp Feature: gene Location: 8818-9343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8842-9076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 8 42-9076 bp Feature: gene Location: 9417-9656 bp Feature: gene Location: 10953-11156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), COG2509 (FAD-dependent dehydrogenase ), RVT-GII

Seq: NIQC01000019.1 Natranaerobius trueperi strain DSM 18760 ZB100018, whole genome shotgun sequence (51377 bp)
Overview 1 RT 1: 43671-48588 bp Neighborhood of RT #1 [43671, 48588] flavo_cyto_c FMN_bind RVT-GII Cu_amine_oxidN1 Feature: gene Location: 43671-45398 bp Ori: OWZ83409.1 Feature: domain Description: flavo_cyto_c Location: 43812-45123 bp Feature: domain Description: flavo_cyto_c Location: 43812-45123 bp Feature: domain Description: FMN_bind Location: 45177-45396 bp Feature: domain Description: FMN_bind Location: 45177-4539 6 bp Feature: gene Location: 45624-45880 bp Feature: gene Location: 45979-46291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45982-46150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459 82-46150 bp Feature: gene Location: 46779-47996 bp Ori: OWZ83410.1 Feature: domain Description: Cu_amine_oxidN1 Location: 47589-47733 bp Feature: domain Description: Cu_amine_oxidN1 Location: 47589 -47733 bp Feature: gene Location: 48148-48588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT flavo_cyto_c (TIGR01813), FMN_bind (smart00900), RVT-GII, Cu_amine_oxidN1 (pfam07833)

Seq: NIQC01000016.1 Natranaerobius trueperi strain DSM 18760 ZB100015, whole genome shotgun sequence (56740 bp)
Overview 1 RT 1: 42707-48275 bp Neighborhood of RT #1 [42707, 48283] Fe-ADH PBP2_ChoX RVT-GII GIIM AroA Feature: gene Location: 42707-43888 bp Ori: OWZ83553.1 Feature: domain Description: Fe-ADH Location: 42752-43874 bp Feature: domain Description: Fe-ADH Location: 42752-43874 bp Feature: gene Location: 44101-45102 bp Ori: OWZ83554.1 Feature: domain Description: PBP2_ChoX Location: 44263-45049 bp Feature: domain Description: PBP2_ChoX Location: 44263-45049 bp Feature: gene Location: 45701-46031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45704-45869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45704-45869 bp Feature: gene Location: 46033-46374 bp Feature: domain Description: GIIM Note: maturase Location: 46039-46180 bp Feature: domain Description: GIIM Note: maturase Location: 46039-46180 bp Feature: gene Location: 46964-48283 bp Ori: OWZ83555.1 Gene: aroA Feature: domain Description: AroA Location: 46988-48275 bp Feature: domain Description: AroA Location: 46988-48275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fe-ADH (pfam00465), PBP2_ChoX (cd13640), RVT-GII, GIIM (pfam08388), AroA (COG0128)

Seq: NIQC01000068.1 Natranaerobius trueperi strain DSM 18760 ZB100067, whole genome shotgun sequence (1140 bp)
Overview 1 RT 1: 325-1138 bp Neighborhood of RT #1 [325, 1140] RVT-GII Feature: gene Location: 325-1140 bp Ori: OWZ82636.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 598-1138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 598-11 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQC01000018.1 Natranaerobius trueperi strain DSM 18760 ZB100017, whole genome shotgun sequence (51557 bp)
Overview 1 RT 1: 1-3358 bp Neighborhood of RT #1 [1, 3396] RVT-GII AroE PotE Feature: gene Location: 1-732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-628 bp Feature: gene Location: 1224-2132 bp Ori: OWZ83415.1 Gene: aroE Feature: domain Description: AroE Location: 1320-2127 bp Feature: domain Description: AroE Location: 1320-212 7 bp Feature: gene Location: 2047-3396 bp Ori: OWZ83416.1 Feature: domain Description: PotE Location: 2071-3358 bp Feature: domain Description: PotE Location: 2071-3358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AroE (COG0169), PotE (COG0531)

Seq: NIQC01000015.1 Natranaerobius trueperi strain DSM 18760 ZB100014, whole genome shotgun sequence (59884 bp)
Overview 1 RT 1: 1-5745 bp Neighborhood of RT #1 [1, 5762] HTH_23 RVT-GII Tra8 F420_ligase Feature: gene Location: 1-1523 bp Feature: domain Description: HTH_23 Location: 19-133 bp Feature: domain Description: HTH_23 Location: 19-13 3 bp Feature: gene Location: 1560-2785 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1719-2328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1719-2328 bp Feature: gene Location: 2933-3977 bp Feature: domain Description: Tra8 Location: 2966-3500 bp Feature: domain Description: Tra8 Location: 2966-3500 bp Feature: gene Location: 4209-5762 bp Ori: OWZ83569.1 Feature: domain Description: F420_ligase Location: 4257-5745 bp Feature: domain Description: F420_ligase Location: 4257-5745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), RVT-GII, Tra8 (COG2826), F420_ligase (pfam01996)

Seq: NIQC01000058.1 Natranaerobius trueperi strain DSM 18760 ZB100057, whole genome shotgun sequence (2283 bp)
Overview 1 RT 1: 327-2262 bp Neighborhood of RT #1 [327, 2283] Ugd UDPG_MGDP_dh_N RVT-GII GIIM TnpB_IS66 Feature: gene Location: 327-563 bp Feature: domain Description: Ugd Location: 342-552 bp Feature: domain Description: Ugd Location: 342-552 bp Feature: gene Location: 649-981 bp Ori: OWZ82648.1 Feature: domain Description: UDPG_MGDP_dh_N Location: 658-976 bp Feature: domain Description: UDPG_MGDP_dh_N Location: 658-976 bp Feature: gene Location: 1461-2222 bp Ori: OWZ82649.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560-1767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560-1767 bp Feature: domain Description: GIIM Note: maturase Location: 1818-2034 bp Feature: domain Description: GIIM Note: maturase Location: 1818-2034 bp Feature: gene Location: 2112-2283 bp Ori: OWZ82650.1 Feature: domain Description: TnpB_IS66 Location: 2151-2262 bp Feature: domain Description: TnpB_IS66 Location: 2151-2262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ugd (COG1004), UDPG_MGDP_dh_N (pfam03721), RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)

Seq: NIQC01000077.1 Natranaerobius trueperi strain DSM 18760 ZB100076, whole genome shotgun sequence (670 bp)
Overview 1 RT 1: 85-670 bp Neighborhood of RT #1 [85, 670] RVT-GII Feature: gene Location: 85-670 bp Ori: OWZ82629.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQC01000104.1 Natranaerobius trueperi strain DSM 18760 ZB100104, whole genome shotgun sequence (340 bp)
Overview 1 RT 1: 1-336 bp Neighborhood of RT #1 [1, 340] RVT-GII Feature: gene Location: 1-214 bp Feature: gene Location: 189-340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195-336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195-336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQC01000082.1 Natranaerobius trueperi strain DSM 18760 ZB100081, whole genome shotgun sequence (581 bp)
Overview 1 RT 1: 1-581 bp Neighborhood of RT #1 [1, 581] RVT-GII Feature: gene Location: 1-228 bp Ori: OWZ82623.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13-100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13-100 bp Feature: gene Location: 244-581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQC01000070.1 Natranaerobius trueperi strain DSM 18760 ZB100069, whole genome shotgun sequence (938 bp)
Overview 1 RT 1: 79-490 bp Neighborhood of RT #1 [79, 938] RVT-GII Feature: gene Location: 79-938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NIQC01000021.1 Natranaerobius trueperi strain DSM 18760 ZB100020, whole genome shotgun sequence (42062 bp)
Overview 1 RT 1: 1-2933 bp Neighborhood of RT #1 [1, 2935] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII RVT-GII GIIM zinc_ribbon_13 Feature: gene Location: 1-399 bp Ori: OWZ83299.1 Feature: domain Description: DDE_Tnp_IS66 Location: 4-208 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-208 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 229-349 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 229-349 bp Feature: gene Location: 645-1919 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1329-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1329-1470 bp Feature: domain Description: GIIM Note: maturase Location: 1551-1725 bp Feature: domain Description: GIIM Note: maturase Location: 1551-1725 bp Feature: gene Location: 2163-2369 bp Feature: gene Location: 2684-2935 bp Ori: OWZ83301.1 Feature: domain Description: zinc_ribbon_13 Location: 2729-2933 bp Feature: domain Description: zinc_ribbon_13 Location: 2729-2933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), zinc_ribbon_13 (pfam09855)

Seq: NIQC01000003.1 Natranaerobius trueperi strain DSM 18760 ZB100002, whole genome shotgun sequence (130639 bp)
Overview 1 RT 1: 68979-71976 bp Neighborhood of RT #1 [68979, 72137] PBP2_OpuAC_like RVT-GII HDGYP HTH_XRE Feature: gene Location: 68979-69845 bp Ori: OWZ84627.1 Feature: domain Description: PBP2_OpuAC_like Location: 69078-69840 bp Feature: domain Description: PBP2_OpuAC_like Location: 69078-69840 bp Feature: gene Location: 69979-70185 bp Feature: gene Location: 70536-70856 bp Ori: OWZ84629.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70623-70743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70623-70743 bp Feature: gene Location: 71000-71626 bp Ori: OWZ84630.1 Feature: domain Description: HDGYP Location: 71084-71585 bp Feature: domain Description: HDGYP Location: 71084-71585 bp Feature: gene Location: 71763-72137 bp Ori: OWZ84631.1 Feature: domain Description: HTH_XRE Location: 71805-71976 bp Feature: domain Description: HTH_XRE Location: 71805-71976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_OpuAC_like (cd13639), RVT-GII, HDGYP (COG2206), HTH_XRE (smart00530)