myRT

myRT report for GCA_002216645.1_ASM221664v1

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Seq: MKHA01000001.1 Pseudomonas fluorescens strain TR3 kmer60-min500.1030, whole genome shotgun sequence (1189908 bp)
Overview 1 RT 1: 1016577-1021819 bp Neighborhood of RT #1 [1016577, 1021848] ACR3 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 1016577-1017539 bp Feature: domain Description: ACR3 Location: 1016592-1017519 bp Feature: domain Description: ACR3 Location: 1 01 6592-1 01 751 9 bp Feature: gene Location: 1017578-1017712 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1017584-1017695 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 01 7584-1 01 7695 bp Feature: gene Location: 1017904-1019565 bp Feature: RT Description: RVT_N Location: 1017949-1018192 bp Feature: RT Description: RVT_N Location: 1 01 7949-1 01 81 92 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1018237-1018873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 8237-1 01 8873 bp Feature: domain Description: GIIM Note: maturase Location: 1018930-1019158 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 8930-1 01 91 58 bp Feature: gene Location: 1020123-1021451 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1020255-1020462 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 020255-1 020462 bp Feature: domain Description: zf-IS66 Location: 1020501-1020615 bp Feature: domain Description: zf-IS66 Location: 1 020501 -1 02061 5 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1020657-1021431 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 020657-1 021 431 bp Feature: gene Location: 1021513-1021848 bp Feature: domain Description: TnpB_IS66 Location: 1021531-1021819 bp Feature: domain Description: TnpB_IS66 Location: 1 021 531 -1 021 81 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACR3 (COG0798), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)