myRT

myRT report for GCA_002216895.1_ASM221689v1

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Seq: MKFK01000213.1 Escherichia coli strain CoR-1 250_length_92766_cov_38.880516_1_1_57013, whole genome shotgun sequence (57013 bp)
Overview 1 RT 1: 11780-17059 bp Neighborhood of RT #1 [11780, 17175] RVT-UG7 PRK09692 Phage_int_SAM_5 INT_C_like_1 Feature: gene Location: 11780-11920 bp Feature: gene Location: 12030-12770 bp Feature: gene Location: 12767-14395 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 13175-13604 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 31 75-1 3604 bp Feature: gene Location: 14388-15572 bp Feature: domain Description: PRK09692 Location: 14394-15549 bp Feature: domain Description: PRK09692 Location: 1 4394-1 5549 bp Feature: gene Location: 15841-17175 bp Feature: domain Description: Phage_int_SAM_5 Location: 16210-16447 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 621 0-1 6447 bp Feature: domain Description: INT_C_like_1 Location: 16543-17059 bp Feature: domain Description: INT_C_like_1 Location: 1 6543-1 7059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184)

Seq: MKFK01000068.1 Escherichia coli strain CoR-1 67_length_238812_cov_36.291161_1_1_21714, whole genome shotgun sequence (21714 bp)
Overview 1 RT 1: 6569-9645 bp Neighborhood of RT #1 [6569, 9710] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 6569-6790 bp Feature: domain Description: PHA02517 Location: 6572-6785 bp Feature: domain Description: PHA02 517 Location: 6572 -6785 bp Feature: gene Location: 6845-7048 bp Feature: gene Location: 7116-8462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7212-7944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 12 -7944 bp Feature: domain Description: GIIM Note: maturase Location: 8019-8217 bp Feature: domain Description: GIIM Note: maturase Location: 8019-82 17 bp Feature: gene Location: 8593-9018 bp Feature: gene Location: 9231-9710 bp Feature: domain Description: PHA02517 Location: 9291-9645 bp Feature: domain Description: PHA02 517 Location: 92 91-9645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)