myRT

myRT report for GCA_002216955.1_ASM221695v1

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Seq: MKFM01000136.1 Escherichia coli strain CoR-3 134_length_2144_cov_84.814369, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MKFM01000029.1 Escherichia coli strain CoR-3 28_length_378695_cov_39.449409_2_77998_378823, whole genome shotgun sequence (300826 bp)
Overview 1 RT 1: 78142-82526 bp Neighborhood of RT #1 [78142, 83428] RVT-Retrons Phage_GPA Feature: gene Location: 78142-78303 bp Feature: gene Location: 78441-79241 bp Feature: gene Location: 79407-80357 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79590-80124 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79590-8012 4 bp Feature: gene Location: 80680-80973 bp Feature: gene Location: 81278-83428 bp Feature: domain Description: Phage_GPA Location: 81539-82526 bp Feature: domain Description: Phage_GPA Location: 81539-82 52 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Phage_GPA (pfam05840)

Seq: MKFM01000005.1 Escherichia coli strain CoR-3 5_length_175642_cov_41.896893, whole genome shotgun sequence (175770 bp)
Overview 1 RT 1: 146808-151099 bp Neighborhood of RT #1 [146808, 151099] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 146808-148070 bp Feature: domain Description: YesM Location: 147321-148062 bp Feature: domain Description: YesM Location: 1473 21-148062 bp Feature: gene Location: 148100-148270 bp Feature: gene Location: 148620-149141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148626-148908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148626-148908 bp Feature: domain Description: GIIM Note: maturase Location: 148956-149136 bp Feature: domain Description: GIIM Note: maturase Location: 148956-14913 6 bp Feature: gene Location: 149169-149708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149499-149577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149499-149577 bp Feature: gene Location: 149739-149936 bp Feature: gene Location: 150194-151099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: MKFM01000093.1 Escherichia coli strain CoR-3 88_length_100179_cov_40.680241_2_23541_100307, whole genome shotgun sequence (76767 bp)
Overview 1 RT 1: 34095-39764 bp Neighborhood of RT #1 [34095, 39790] SR_ResInv DUF262 DUF1524 RVT-Retrons PBP2_CrgA_like_5 Feature: gene Location: 34095-34322 bp Feature: domain Description: SR_ResInv Location: 34140-34257 bp Feature: domain Description: SR_ResInv Location: 34 14 0-34 257 bp Feature: gene Location: 34356-36245 bp Feature: domain Description: DUF262 Location: 34380-35124 bp Feature: domain Description: DUF262 Location: 34 380-35124 bp Feature: domain Description: DUF1524 Location: 35709-36213 bp Feature: domain Description: DUF1524 Location: 35709-36213 bp Feature: gene Location: 37043-38878 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37178-37874 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37178-37874 bp Feature: gene Location: 38990-39118 bp Feature: gene Location: 39380-39790 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 39452-39764 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 394 52-39764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), DUF262 (pfam03235), DUF1524 (pfam07510), RVT-Retrons, PBP2_CrgA_like_5 (cd08474)