myRT

myRT report for GCA_002217075.1_ASM221707v1

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Seq: MKIJ01000011.1 Escherichia coli strain CoR-11 11_length_16284_cov_68.421516, whole genome shotgun sequence (16412 bp)
Overview 1 RT 1: 369-3525 bp Neighborhood of RT #1 [369, 3542] DDE_Tnp_IS1 InsA RVT-GII PRK10276 Feature: gene Location: 369-746 bp Feature: domain Description: DDE_Tnp_IS1 Location: 372-744 bp Feature: domain Description: DDE_Tnp_IS1 Location: 372-744 bp Feature: gene Location: 791-1066 bp Feature: domain Description: InsA Location: 794-1058 bp Feature: domain Description: InsA Location: 794-1 058 bp Feature: gene Location: 1218-2228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224-1836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 224-1 836 bp Feature: gene Location: 2340-2705 bp Feature: gene Location: 2730-3542 bp Feature: domain Description: PRK10276 Location: 3162-3525 bp Feature: domain Description: PRK1 0276 Location: 31 62-3525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DDE_Tnp_IS1 (pfam03400), InsA (COG3677)

Seq: MKIJ01000012.1 Escherichia coli strain CoR-11 12_length_252708_cov_35.349987, whole genome shotgun sequence (252836 bp)
Overview 1 RT 1: 95062-101464 bp Neighborhood of RT #1 [95062, 101469] DUF2971 RVT-Retrons Q P Feature: gene Location: 95062-95220 bp Feature: gene Location: 95345-96463 bp Feature: domain Description: DUF2971 Location: 95852-96110 bp Feature: domain Description: DUF2 971 Location: 95852 -96110 bp Feature: gene Location: 96865-98622 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 97009-97630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 97009-97630 bp Feature: gene Location: 98672-99703 bp Feature: domain Description: Q Location: 98675-99698 bp Feature: domain Description: Q Location: 98675-99698 bp Feature: gene Location: 99703-101469 bp Feature: domain Description: P Location: 99730-101464 bp Feature: domain Description: P Location: 99730-101464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2971 (pfam11185), RVT-Retrons, Q (PHA02536), P (PHA02535)