myRT

myRT report for GCA_002217115.1_ASM221711v1

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Seq: MKIL01000013.1 Escherichia coli strain CoR-40 14_length_143937_cov_39.431557, whole genome shotgun sequence (144065 bp)
Overview 1 RT 1: 752-6348 bp Neighborhood of RT #1 [752, 6365] Q RVT-AbiP2 Phage_GPA DUF5405 Feature: gene Location: 752-1786 bp Feature: domain Description: Q Location: 755-1778 bp Feature: domain Description: Q Location: 755-1 778 bp Feature: gene Location: 1825-1986 bp Feature: gene Location: 1999-3711 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2581-3034 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2581 -3034 bp Feature: gene Location: 3815-6142 bp Feature: domain Description: Phage_GPA Location: 4256-5243 bp Feature: domain Description: Phage_GPA Location: 4256-5243 bp Feature: gene Location: 6090-6365 bp Feature: domain Description: DUF5405 Location: 6108-6348 bp Feature: domain Description: DUF5405 Location: 61 08-6348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840), DUF5405 (pfam17399)

Seq: MKIL01000042.1 Escherichia coli strain CoR-40 42_length_78643_cov_43.147526, whole genome shotgun sequence (78771 bp)
Overview 1 RT 1: 68291-73054 bp Neighborhood of RT #1 [68291, 73146] PRK09692 SLATT_5 RVT-UG17 Psu PRK09678 PRK09678 Feature: gene Location: 68291-69469 bp Feature: domain Description: PRK09692 Location: 68300-69452 bp Feature: domain Description: PRK09692 Location: 68300-69452 bp Feature: gene Location: 69486-70223 bp Feature: domain Description: SLATT_5 Location: 69585-70191 bp Feature: domain Description: SLATT_5 Location: 69585-70191 bp Feature: gene Location: 70322-71731 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 70559-71171 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 70559-71171 bp Feature: gene Location: 72054-72626 bp Feature: domain Description: Psu Location: 72072-72609 bp Feature: domain Description: Psu Location: 72 072 -72 609 bp Feature: gene Location: 72700-73146 bp Feature: domain Description: PRK09678 Location: 72709-72781 bp Feature: domain Description: PRK09678 Location: 72 709-72 781 bp Feature: domain Description: PRK09678 Location: 72904-73054 bp Feature: domain Description: PRK09678 Location: 72 904-73054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)