myRT

myRT report for GCA_002217135.1_ASM221713v1

Download annotations/find similar RTs

Seq: MKII01000101.1 Escherichia coli strain CoR-37 123_length_185194_cov_44.891590_1_1_184264, whole genome shotgun sequence (184264 bp)
Overview 1 RT 1: 130880-134763 bp Neighborhood of RT #1 [130880, 134768] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 130880-131596 bp Feature: domain Description: rph Location: 130883-131591 bp Feature: domain Description: rph Location: 1 30883-1 31 591 bp Feature: gene Location: 131648-132304 bp Feature: domain Description: pyrE Location: 131666-132299 bp Feature: domain Description: pyrE Location: 1 31 666-1 32299 bp Feature: gene Location: 132602-133561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132737-133286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 32737-1 33286 bp Feature: gene Location: 133607-134203 bp Feature: domain Description: slmA Location: 133613-134189 bp Feature: domain Description: slmA Location: 1 3361 3-1 341 89 bp Feature: gene Location: 134310-134768 bp Feature: domain Description: dut Location: 134316-134763 bp Feature: domain Description: dut Location: 1 3431 6-1 34763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: MKII01000020.1 Escherichia coli strain CoR-37 19_length_20156_cov_45.237251, whole genome shotgun sequence (20284 bp)
Overview 1 RT 1: 16524-20055 bp Neighborhood of RT #1 [16524, 20282] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 16524-16664 bp Feature: gene Location: 16677-17228 bp Feature: domain Description: SLATT_5 Location: 16683-17199 bp Feature: domain Description: SLATT_5 Location: 16683-17199 bp Feature: gene Location: 17206-18576 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17434-18040 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17434-18040 bp Feature: gene Location: 18657-18989 bp Feature: gene Location: 19014-20282 bp Feature: domain Description: Peptidase_S74 Location: 19908-20055 bp Feature: domain Description: Peptidase_S74 Location: 19908-2 0055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)