myRT

myRT report for GCA_002217445.1_ASM221744v1

Download annotations/find similar RTs

Seq: MUHG01000020.1 Flavobacterium spartansii strain ATCC BAA-2541 43441_contig_20, whole genome shotgun sequence (21437 bp)
Overview 1 RT 1: 9759-14713 bp Neighborhood of RT #1 [9759, 14713] AbiEii RVT-UG2 Feature: gene Location: 9759-10409 bp Ori: OXB18920.1 Feature: domain Description: AbiEii Location: 9801-10308 bp Feature: domain Description: AbiEii Location: 9801 -1 0308 bp Feature: gene Location: 10860-11144 bp Feature: gene Location: 12481-14067 bp Ori: OXB18922.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12745-13666 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 2745-1 3666 bp Feature: gene Location: 14360-14581 bp Feature: gene Location: 14498-14713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT-UG2

Seq: MUHG01000013.1 Flavobacterium spartansii strain ATCC BAA-2541 43441_contig_13, whole genome shotgun sequence (106021 bp)
Overview 1 RT 1: 51063-57344 bp Neighborhood of RT #1 [51063, 57344] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Feature: gene Location: 51063-53417 bp Feature: domain Description: Bac_Flav_CT_G Location: 51075-53415 bp Feature: domain Description: Bac_Flav_CT_G Location: 51075-53415 bp Feature: gene Location: 53350-53938 bp Feature: gene Location: 53978-55792 bp Ori: OXB20582.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54242-55064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542 42 -55064 bp Feature: domain Description: Intron_maturas2 Location: 55199-55427 bp Feature: domain Description: Intron_maturas2 Location: 55199-5542 7 bp Feature: domain Description: HNHc Note: nucleases Location: 55613-55763 bp Feature: domain Description: HNHc Note: nucleases Location: 55613-55763 bp Feature: gene Location: 56031-56714 bp Feature: gene Location: 56730-57344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)