myRT

myRT report for GCA_002218695.1_ASM221869v1

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Seq: LYQW01000022.1 Lactobacillus crispatus strain UMNLC6 crispatus9I3S1913, whole genome shotgun sequence (134638 bp)
Overview 1 RT 1: 25713-29734 bp Neighborhood of RT #1 [25713, 29739] Glyco_hydro_8 Tra8 Tra8 RVT-GII ribH Feature: gene Location: 25713-26810 bp Ori: OXC22713.1 Feature: domain Description: Glyco_hydro_8 Location: 25830-26802 bp Feature: domain Description: Glyco_hydro_8 Location: 25830-26802 bp Feature: gene Location: 27177-27842 bp Feature: domain Description: Tra8 Location: 27207-27624 bp Feature: domain Description: Tra8 Location: 27207-27624 bp Feature: domain Description: Tra8 Location: 27726-27831 bp Feature: domain Description: Tra8 Location: 27726-27831 bp Feature: gene Location: 28232-28816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28235-28793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28235-28793 bp Feature: gene Location: 28999-29196 bp Feature: gene Location: 29275-29739 bp Ori: OXC22715.1 Feature: domain Description: ribH Location: 29278-29734 bp Feature: domain Description: ribH Location: 29278-29734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_8 (pfam01270), Tra8 (COG2826), RVT-GII, ribH (PRK00061)

Seq: LYQW01000006.1 Lactobacillus crispatus strain UMNLC6 crispatus9I3S19114, whole genome shotgun sequence (101152 bp)
Overview 1 RT 1: 10468-17682 bp Neighborhood of RT #1 [10468, 18757] COG5421 RVT-AbiK Abi_2 Glyco_hydro_68 Feature: gene Location: 10468-12219 bp Ori: OXC23621.1 Feature: domain Description: COG5421 Location: 11053-11962 bp Feature: domain Description: COG542 1 Location: 11053-11962 bp Feature: gene Location: 12372-12464 bp Feature: gene Location: 13149-15116 bp Ori: OXC23622.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 13569-14031 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 13569-14031 bp Feature: gene Location: 15517-16503 bp Ori: OXC23623.1 Feature: domain Description: Abi_2 Location: 15619-16243 bp Feature: domain Description: Abi_2 Location: 15619-162 43 bp Feature: gene Location: 16761-18757 bp Feature: domain Description: Glyco_hydro_68 Location: 17319-17682 bp Feature: domain Description: Glyco_hydro_68 Location: 17319-17682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-AbiK, Abi_2 (pfam07751), Glyco_hydro_68 (pfam02435)