myRT

myRT report for GCA_002218775.1_ASM221877v1

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Seq: LYQX01000067.1 Lactobacillus crispatus strain UMNLC7 crispatus9I5S20184, whole genome shotgun sequence (1286 bp)
Overview 1 RT 1: 1-889 bp Neighborhood of RT #1 [1, 1021] RVT-AbiK Feature: gene Location: 1-1021 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 469-889 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 469-889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK

Seq: LYQX01000039.1 Lactobacillus crispatus strain UMNLC7 crispatus9I5S20148, whole genome shotgun sequence (5272 bp)
Overview 1 RT 1: 2410-5271 bp Neighborhood of RT #1 [2410, 5272] Glyco_hydro_8 Tra8 Tra8 RVT-GII Feature: gene Location: 2410-3507 bp Ori: OXC24777.1 Feature: domain Description: Glyco_hydro_8 Location: 2527-3499 bp Feature: domain Description: Glyco_hydro_8 Location: 2 52 7-3499 bp Feature: gene Location: 3874-4539 bp Feature: domain Description: Tra8 Location: 3904-4321 bp Feature: domain Description: Tra8 Location: 3904-432 1 bp Feature: domain Description: Tra8 Location: 4423-4528 bp Feature: domain Description: Tra8 Location: 442 3-452 8 bp Feature: gene Location: 4929-5272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4932-5271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4932 -52 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_8 (pfam01270), Tra8 (COG2826), RVT-GII

Seq: LYQX01000040.1 Lactobacillus crispatus strain UMNLC7 crispatus9I5S20149, whole genome shotgun sequence (5771 bp)
Overview 1 RT 1: 2373-5550 bp Neighborhood of RT #1 [2373, 5771] COG3464 LysR RVT-GII GIIM Feature: gene Location: 2373-3646 bp Feature: domain Description: COG3464 Location: 2505-2877 bp Feature: domain Description: COG3 464 Location: 2505-2877 bp Feature: gene Location: 3978-4811 bp Ori: OXC24765.1 Feature: domain Description: LysR Location: 3984-4800 bp Feature: domain Description: LysR Location: 3 984-4800 bp Feature: gene Location: 4881-5771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4953-5292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4953 -5292 bp Feature: domain Description: GIIM Note: maturase Location: 5349-5550 bp Feature: domain Description: GIIM Note: maturase Location: 53 49-5550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3464 (Transposase ), LysR (COG0583), RVT-GII, GIIM (pfam08388)