myRT

myRT report for GCA_002218855.1_ASM221885v1

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Seq: LYRC01000025.1 Lactobacillus crispatus strain UMNLC12 crispatus9E7S25135, whole genome shotgun sequence (51874 bp)
Overview 1 RT 1: 16284-20302 bp Neighborhood of RT #1 [16284, 20310] ribH RVT-GII Tra8 Tra8 Glyco_hydro_8 Feature: gene Location: 16284-16748 bp Ori: OXC33019.1 Feature: domain Description: ribH Location: 16287-16743 bp Feature: domain Description: ribH Location: 1 6287-1 6743 bp Feature: gene Location: 16827-17024 bp Feature: gene Location: 17207-17791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17210-17768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 721 0-1 7768 bp Feature: gene Location: 18181-18846 bp Feature: domain Description: Tra8 Location: 18211-18628 bp Feature: domain Description: Tra8 Location: 1 821 1 -1 8628 bp Feature: domain Description: Tra8 Location: 18730-18835 bp Feature: domain Description: Tra8 Location: 1 8730-1 8835 bp Feature: gene Location: 19213-20310 bp Ori: OXC33021.1 Feature: domain Description: Glyco_hydro_8 Location: 19330-20302 bp Feature: domain Description: Glyco_hydro_8 Location: 1 9330-20302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ribH (PRK00061), RVT-GII, Tra8 (COG2826), Glyco_hydro_8 (pfam01270)

Seq: LYRC01000015.1 Lactobacillus crispatus strain UMNLC12 crispatus9E7S25125, whole genome shotgun sequence (6731 bp)
Overview 1 RT 1: 3332-6731 bp Neighborhood of RT #1 [3332, 6731] DUF956 group_II_RT_mat RVT-GII GIIM LysR Feature: gene Location: 3332-3700 bp Ori: OXC33813.1 Feature: domain Description: DUF956 Location: 3335-3683 bp Feature: domain Description: DUF956 Location: 3335-3683 bp Feature: gene Location: 4305-4487 bp Ori: OXC33814.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 4338-4464 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4338-4464 bp Feature: gene Location: 4613-5383 bp Ori: OXC33815.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4616-4904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4616-4904 bp Feature: domain Description: GIIM Note: maturase Location: 4961-5162 bp Feature: domain Description: GIIM Note: maturase Location: 4961-5162 bp Feature: gene Location: 5453-6286 bp Ori: OXC33816.1 Feature: domain Description: LysR Location: 5459-6275 bp Feature: domain Description: LysR Location: 5459-62 75 bp Feature: gene Location: 6555-6731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF956 (pfam06115), group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), LysR (COG0583)

Seq: LYRC01000031.1 Lactobacillus crispatus strain UMNLC12 crispatus9E7S25142, whole genome shotgun sequence (6494 bp)
Overview 1 RT 1: 1-4767 bp Neighborhood of RT #1 [1, 4871] RVT-AbiK Abi_2 Glyco_hydro_68 Feature: gene Location: 1-1252 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 421-883 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 421-883 bp Feature: gene Location: 1654-2640 bp Ori: OXC32783.1 Feature: domain Description: Abi_2 Location: 1756-2380 bp Feature: domain Description: Abi_2 Location: 1756-23 80 bp Feature: gene Location: 2898-4871 bp Ori: OXC32784.1 Feature: domain Description: Glyco_hydro_68 Location: 3432-4767 bp Feature: domain Description: Glyco_hydro_68 Location: 3 43 2-4767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, Abi_2 (pfam07751), Glyco_hydro_68 (pfam02435)