myRT

myRT report for GCA_002218895.1_ASM221889v1

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Seq: LYRF01000023.1 Lactobacillus crispatus strain UMNLC15 crispatus10B6S28122, whole genome shotgun sequence (47220 bp)
Overview 1 RT 1: 30522-34543 bp Neighborhood of RT #1 [30522, 34548] Glyco_hydro_8 Tra8 Tra8 RVT-GII ribH Feature: gene Location: 30522-31619 bp Ori: OXC39358.1 Feature: domain Description: Glyco_hydro_8 Location: 30639-31611 bp Feature: domain Description: Glyco_hydro_8 Location: 30639-31 61 1 bp Feature: gene Location: 31986-32651 bp Feature: domain Description: Tra8 Location: 32016-32433 bp Feature: domain Description: Tra8 Location: 3201 6-32433 bp Feature: domain Description: Tra8 Location: 32535-32640 bp Feature: domain Description: Tra8 Location: 32535-32640 bp Feature: gene Location: 33041-33625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33044-33602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33044-33602 bp Feature: gene Location: 33808-34005 bp Feature: gene Location: 34084-34548 bp Ori: OXC39360.1 Feature: domain Description: ribH Location: 34087-34543 bp Feature: domain Description: ribH Location: 34087-34543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_8 (pfam01270), Tra8 (COG2826), RVT-GII, ribH (PRK00061)

Seq: LYRF01000012.1 Lactobacillus crispatus strain UMNLC15 crispatus10B6S281127, whole genome shotgun sequence (1091 bp)
Overview 1 RT 1: 80-962 bp Neighborhood of RT #1 [80, 970] RVT-AbiK Feature: gene Location: 80-970 bp Ori: OXC40282.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 500-962 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 500-962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK

Seq: LYRF01000038.1 Lactobacillus crispatus strain UMNLC15 crispatus10B6S28135, whole genome shotgun sequence (6284 bp)
Overview 1 RT 1: 258-3195 bp Neighborhood of RT #1 [258, 3212] LysR RVT-GII GIIM group_II_RT_mat DUF956 Feature: gene Location: 258-1091 bp Ori: OXC38289.1 Feature: domain Description: LysR Location: 264-1080 bp Feature: domain Description: LysR Location: 264-1080 bp Feature: gene Location: 1161-1931 bp Ori: OXC38283.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164-1452 bp Feature: domain Description: GIIM Note: maturase Location: 1509-1710 bp Feature: domain Description: GIIM Note: maturase Location: 1509-1710 bp Feature: gene Location: 2057-2239 bp Ori: OXC38284.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 2090-2216 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2090-2216 bp Feature: gene Location: 2844-3212 bp Ori: OXC38285.1 Feature: domain Description: DUF956 Location: 2847-3195 bp Feature: domain Description: DUF956 Location: 2847-3 195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416), DUF956 (pfam06115)