myRT

myRT report for GCA_002220915.1_ASM222091v1

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Seq: MPPM01000001.1 Vibrio parahaemolyticus strain MA561 MA561scaffold1.1, whole genome shotgun sequence (1135611 bp)
Overview 1 RT 1: 774549-781276 bp Neighborhood of RT #1 [774549, 781276] HTH_XRE AAA_15 RVT_N RVT-GII GIIM PRK09672 Feature: gene Location: 774549-774809 bp Feature: domain Description: HTH_XRE Location: 774594-774747 bp Feature: domain Description: HTH_XRE Location: 774594-774747 bp Feature: gene Location: 775169-777022 bp Feature: domain Description: AAA_15 Location: 775175-776291 bp Feature: domain Description: AAA_1 5 Location: 7751 75-776291 bp Feature: gene Location: 777224-778696 bp Feature: RT Description: RVT_N Location: 777272-777515 bp Feature: RT Description: RVT_N Location: 777272-77751 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777560-778187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777560-7781 87 bp Feature: domain Description: GIIM Note: maturase Location: 778247-778472 bp Feature: domain Description: GIIM Note: maturase Location: 778247-778472 bp Feature: gene Location: 779403-780395 bp Feature: domain Description: PRK09672 Location: 779817-780240 bp Feature: domain Description: PRK09672 Location: 77981 7-780240 bp Feature: gene Location: 780818-781276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), AAA_15 (pfam13175), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK09672 (phage exclusion protein Lit; Provisional)