myRT

myRT report for GCA_002220935.1_ASM222093v1

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Seq: MPPN01000005.1 Vibrio parahaemolyticus strain G6928 G6928scaffold5.1, whole genome shotgun sequence (341028 bp)
Overview 1 RT 1: 272388-279115 bp Neighborhood of RT #1 [272388, 279115] HTH_XRE AAA_15 RVT_N RVT-GII GIIM PRK09672 Feature: gene Location: 272388-272648 bp Feature: domain Description: HTH_XRE Location: 272433-272586 bp Feature: domain Description: HTH_XRE Location: 272433-272586 bp Feature: gene Location: 273008-274861 bp Feature: domain Description: AAA_15 Location: 273014-274130 bp Feature: domain Description: AAA_1 5 Location: 27301 4-2741 30 bp Feature: gene Location: 275063-276535 bp Feature: RT Description: RVT_N Location: 275111-275354 bp Feature: RT Description: RVT_N Location: 2751 1 1 -275354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275399-276026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275399-276026 bp Feature: domain Description: GIIM Note: maturase Location: 276086-276311 bp Feature: domain Description: GIIM Note: maturase Location: 276086-27631 1 bp Feature: gene Location: 277242-278234 bp Feature: domain Description: PRK09672 Location: 277656-278079 bp Feature: domain Description: PRK09672 Location: 277656-278079 bp Feature: gene Location: 278657-279115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), AAA_15 (pfam13175), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK09672 (phage exclusion protein Lit; Provisional)