myRT

myRT report for GCA_002222925.1_ASM222292v1

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Seq: NIHY01000009.1 Escherichia coli strain FC11895 Scaffold9_1, whole genome shotgun sequence (184914 bp)
Overview 1 RT 1: 1-3451 bp Neighborhood of RT #1 [1, 3456] Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 1-648 bp Ori: OXJ50888.1 Feature: domain Description: Peptidase_S74 Location: 274-421 bp Feature: domain Description: Peptidase_S74 Location: 274-421 bp Feature: gene Location: 771-986 bp Feature: gene Location: 1086-2456 bp Ori: OXJ50889.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1314-1920 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 31 4-1 920 bp Feature: gene Location: 2434-2985 bp Ori: OXJ50890.1 Feature: domain Description: SLATT_5 Location: 2440-2956 bp Feature: domain Description: SLATT_5 Location: 2440-2956 bp Feature: gene Location: 3208-3456 bp Ori: OXJ50891.1 Feature: domain Description: PRK10597 Location: 3211-3451 bp Feature: domain Description: PRK1 0597 Location: 321 1 -3451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: NIHY01000008.1 Escherichia coli strain FC11895 Scaffold8_1, whole genome shotgun sequence (185318 bp)
Overview 1 RT 1: 130875-134755 bp Neighborhood of RT #1 [130875, 134760] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 130875-131591 bp Ori: OXJ51174.1 Feature: domain Description: rph Location: 130878-131586 bp Feature: domain Description: rph Location: 130878-131586 bp Feature: gene Location: 131658-132299 bp Ori: OXJ51175.1 Feature: domain Description: pyrE Location: 131661-132294 bp Feature: domain Description: pyrE Location: 131661-132 2 94 bp Feature: gene Location: 132597-133556 bp Ori: OXJ51176.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132732-133281 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132 732 -1332 81 bp Feature: gene Location: 133602-134198 bp Ori: OXJ51177.1 Feature: domain Description: slmA Location: 133608-134184 bp Feature: domain Description: slmA Location: 133608-134184 bp Feature: gene Location: 134305-134760 bp Ori: OXJ51235.1 Feature: domain Description: dut Location: 134308-134755 bp Feature: domain Description: dut Location: 134308-134755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)